Purpureocillium takamizusanense: JDV02_005110
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Entry
JDV02_005110 CDS
T08929
Symbol
exo2
Name
(RefSeq) exonuclease II Exo2
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03008
Ribosome biogenesis in eukaryotes
ptkz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JDV02_005110 (exo2)
09123 Folding, sorting and degradation
03018 RNA degradation
JDV02_005110 (exo2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptkz03019
]
JDV02_005110 (exo2)
03009 Ribosome biogenesis [BR:
ptkz03009
]
JDV02_005110 (exo2)
03016 Transfer RNA biogenesis [BR:
ptkz03016
]
JDV02_005110 (exo2)
03036 Chromosome and associated proteins [BR:
ptkz03036
]
JDV02_005110 (exo2)
Messenger RNA biogenesis [BR:
ptkz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
JDV02_005110 (exo2)
mRNA degradation factors
5'-3' decay
5' exonucleases
JDV02_005110 (exo2)
Ribosome biogenesis [BR:
ptkz03009
]
Eukaryotic type
Pre-60S particles
RNases
JDV02_005110 (exo2)
Transfer RNA biogenesis [BR:
ptkz03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
JDV02_005110 (exo2)
Chromosome and associated proteins [BR:
ptkz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
JDV02_005110 (exo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_N
XRN_M
XRN1_D2_D3
XRN1_D1
SH3_12
R3H
Motif
Other DBs
NCBI-GeneID:
72067060
NCBI-ProteinID:
XP_047842351
UniProt:
A0A9Q8QFV1
LinkDB
All DBs
Position
4:join(1464027..1464031,1464091..1464184,1464241..1464550,1464602..1465903,1465959..1468480)
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AA seq
1410 aa
AA seq
DB search
MGVPKFFRWLSERYPPISQLIAENRIPEFDCLYLDMNGIIHNCTHKDAGEDTTFRLSEEE
MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDNEKAREKAIKEG
VEMPKEEPFDSNCITPGTEFMAKLSLQLRYFVNKKVSEDSDWQGCEVVLSGHEVPGEGEH
KIMEYIRNAKAQPNYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRASKAKSK
ELEHQNFYLLHLCMVREYLEMEFQELGKKGSLTFAFDLEKVIDDFILMAFFVGNDFLPNL
PGLHINEGALANMFVTYKKVLPTCEGYINENGVINMARLQRLLDQLSKLELVSFENDVAD
EKWFAAKQMEKKLEGRNGATSKSSKNGQLVITSSQRDLWKHKIRPYVSKRSKESLNLGSS
LKAADRKFVQDLADAMHLDWSTKEDENADRHLILAFPARPDADDEEEEEEEGNLAAYRVM
KTYDKATVVDMTAEDAQKQYEQLYQDKYQGWKTKYYLQKFPEWPAEKYAVEQKALCENYV
QGLQWVLFYYYRGIASWPWFYGYHYAPLISDVTKGLGADLNFKKGQPFKPYEQLMGVLPD
RSKKIVPKIYHDLMTNPNSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLDAMAP
KNDLLEDDEKARNGFGVPIKFTYSSDVNFTYPSSLPGIFPEIQNCRCIENIFDLPDVEGL
EYLSGLTDGALLNISALAGFPTLHTLPYTAQLVEGYGVNVFQSESKNPSVVVTLTDTKTR
TSVEAWKAKLGQKCYVGYPFLQEAKVMRVQDELFSYELAEDGKQLITKDHSNREASEFAR
EAEYIEGWYGKRLGVTIGQVECLVYVHMLKGLIKTEEGALIKEYAENPSLRSIYASQTIV
YEVVNEDERFIEKAALPIEEEFPIGTRAFFLGEYAYGRPLEITGHVSGKTEVVVSLPKTK
EPDFAKAMIHQAERNNPYTPSFAVAKQLGVHPLVLSKITSSYQILNSAGLKLNLGLNLKF
EGRKLKVLGYSRKSRTGWEFSAAAIKLIADYMVAFPDFFAAIQKEPQRSEITDTDLWKDP
TVASQRVKDIVAWLKKQETSKFERVPLEAEQLDSDVVMALADAGERIFQATQDIDIRKMK
GVPRVAILKPSDAELVLGNQSFQLGDRVTFAAAAGKVPIATRGTVVGISRTATALLLDVL
WDTSFMSGTTLGDRAPMFRGQTVASSSVLNTSDKQVVSASSRSQQRRAAPNQTTGTYGSI
GITQLKDAPTPPPLRGGWRGAMNPDRNSPARRGSPNARGSSAPNLLHSTLVYRGGPNGAQ
SPGQNANGHGRGGNQTGRAGGSGRGRGRGNFEGAQAPSGGEEAPKYGNVPPPVSLDNSRG
GRGRGRGGRGRNGPPRGRGGNGRGGSVAQG
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcccgaaatttttcagatggctctcggagcgatacccgcccatctcccagctc
atcgctgagaacagaataccggagtttgactgcttatacctcgacatgaacggcatcatt
cacaactgtacgcacaaggatgcgggcgaggacacgacctttaggctgagcgaggaggaa
atgttcatccgaatattcaactacattgagcacctatttggcaagatcaagccgaaacag
ctctttttcatggccatcgatggcgtcgctccgcgcgccaagatgaatcagcagcgagcg
cgtcgtttcaggactgccctggataacgagaaggcccgtgaaaaggccattaaggagggt
gtggagatgccaaaggaggaaccctttgatagcaactgtatcaccccaggaaccgagttc
atggcgaagctgtcactgcagctgcggtatttcgtcaacaaaaaggtatcagaagattct
gactggcaagggtgtgaagttgtgctctccggtcatgaggtacctggagaaggagagcac
aagatcatggaatacattcgaaacgcaaaggcgcagccaaactacaaccccaacgtgcga
cactgtctgtacggactcgacgccgacctcatcatgctgggtcttctcagccacgatcct
catttctgcctcttacgcgaagaggtcacgttcggtcgcgcttctaaggccaagtccaag
gagctcgagcatcaaaatttctaccttctccacctctgcatggtgcgggaataccttgaa
atggagtttcaggagctggggaaaaaagggtcattgactttcgccttcgacttggagaag
gtcatcgacgacttcatcctcatggcgttctttgtcggaaacgatttcttgccgaatctg
ccgggtcttcacatcaacgaaggcgctttggcaaacatgtttgtgacctataagaaggtg
ttgccgacatgtgaagggtatattaacgagaatggtgtcatcaacatggcgcgtttgcag
cgccttcttgaccagctcagcaagctggagctagtatcgttcgagaacgacgttgctgac
gagaagtggtttgcagcaaaacagatggagaagaagctcgagggcaggaatggtgcaact
tcaaagtcatccaagaatggccaacttgtcatcacctcctcccagcgcgacctgtggaaa
cacaaaatccgtccctacgtctcaaaacgctccaaagagtcgctgaacctcggttcaagc
cttaaggccgccgatcgcaagttcgtgcaggaccttgccgacgccatgcacctggactgg
tccaccaaggaagacgagaacgcggaccggcatctcatcttggcgtttcccgcccgccct
gacgcagatgatgaggaagaggaagaggaagagggcaacctggctgcctaccgcgtcatg
aagacttacgacaaggccaccgtggtcgacatgaccgcagaggatgcgcaaaagcagtac
gagcagctctaccaagacaagtaccagggctggaagaccaaatattacctgcagaaattc
cctgagtggcctgccgagaagtacgccgtcgagcagaaggcgctctgcgagaactacgtt
cagggcttgcagtgggtgcttttctactactacaggggtattgcctcttggccctggttc
tacggataccactacgcccccctgatctctgatgtcaccaagggcctcggggctgatctc
aacttcaagaaggggcagccattcaagccatatgagcaactcatgggcgtcctgccggac
aggagcaagaaaatcgtgcccaaaatctatcacgatttgatgacaaaccccaattctccc
atcatcgacttttaccctagagactttgaacttgacatgaacgggaagaagatggattgg
gaggccgttgtgaagatccccttcattgatgaaaagcgtctgctagatgccatggcaccc
aagaacgatctcctagaggacgacgaaaaggcacgcaacggtttcggagtgcccatcaag
ttcacctactcatctgacgtcaactttacatacccatcctcgctcccgggcatatttccc
gagatccaaaactgccgctgcatcgaaaatatatttgatttgcccgacgtcgaagggctc
gagtatctttctggccttacggatggcgcgttgctcaacatatctgctcttgctggcttt
ccgacactacacactctcccttacaccgctcagctggttgaaggttatggtgtcaacgtc
tttcagtcggaaagcaagaaccccagtgtcgttgtcacactgacagacacgaagacgcga
actagtgtcgaggcatggaaggccaaacttggccagaaatgctacgttgggtatcccttc
ctccaagaagccaaggtgatgagagtccaggacgagctcttcagctatgagctcgctgag
gatggaaagcagctcatcacgaaagatcactccaacagagaagcgtccgaatttgctagg
gaagccgaatatatcgagggctggtacggaaaacgcttaggcgtaactatcgggcaggtg
gaatgcctcgtttacgtgcacatgctcaagggcctgatcaagaccgaggagggtgctctg
ataaaggagtacgccgaaaaccccagtctacggagcatatacgcatctcaaaccattgtg
tacgaggtcgtcaacgaagacgagcgcttcatcgaaaaggcggctctgcctatcgaggag
gagttcccaatcggcacccgggcgttcttcctgggcgaatatgcctacgggcgtccgctt
gaaatcactggccacgtcagcggcaagactgaagtcgtcgtctcactgcccaagacgaag
gagccagatttcgccaaggccatgatccaccaggcggaacgaaacaacccatacacaccg
tcttttgctgtcgccaagcagcttggagtgcaccctcttgtgctgagcaagatcacatca
tcttaccagatcctcaactcggctggcttaaagctcaatctgggcttgaacctcaaattc
gagggccgcaaactgaaggtactcggctattcccgcaagtctcgcacgggttgggagttt
agcgctgcggccatcaagctcattgccgactacatggtcgcgttcccagacttcttcgcg
gcgatccagaaggagcctcaaaggagcgagatcacggacacggacctttggaaggacccg
accgtggcgtctcagcgagttaaggacatcgtcgcctggctgaagaaacaggagactagc
aagtttgagcgggtgcccctcgaagctgagcagcttgattctgatgtggtcatggccctt
gccgatgctggcgagcgaatcttccaggcgacgcaggatatcgatatccgcaagatgaag
ggtgttcctcgagtggcaattctgaagccatccgatgcggagctggtcctcggaaaccag
agcttccagcttggcgaccgcgtgacctttgcagccgctgcaggcaaggttcccattgcg
acgcgaggcaccgtcgttggcatcagccgcacggccaccgcgctacttctagacgtcctg
tgggacacgtctttcatgagtggcaccactctcggtgacagagcgccgatgttccgcggc
cagacggtcgcgtcatcctcggttcttaacacttcggacaagcaggtcgtctctgcctct
agcaggtcgcagcagcgacgagctgcgccgaaccagacaaccggaacgtacggctcgatc
ggcataacccagctcaaggacgctccaactcctcctcccctgcgaggcggatggcgcggt
gcgatgaaccccgataggaactcgccagctcgccgcggcagcccgaacgctcgcggtagt
agtgctcccaacctgctacatagcactcttgtgtaccgcggcggccccaacggcgcgcag
tccccaggccagaacgcaaacgggcatggccgcgggggcaatcaaaccggcagagctggc
ggcagtggccgcggtcgaggtcgaggcaactttgagggagcacaagcgccttccggtggc
gaggaggctcccaagtatggcaacgtccctccgccagtgagcctcgacaactcacgtggt
ggtcgcggccgcggccgaggtggcaggggacgaaatggtcccccccggggccgcggcggc
aatgggagaggaggtagtgtggcccaaggttag
DBGET
integrated database retrieval system
