Purpureocillium takamizusanense: JDV02_006042
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Entry
JDV02_006042 CDS
T08929
Symbol
PRP43
Name
(RefSeq) RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JDV02_006042 (PRP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptkz03041
]
JDV02_006042 (PRP43)
03009 Ribosome biogenesis [BR:
ptkz03009
]
JDV02_006042 (PRP43)
Enzymes [BR:
ptkz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JDV02_006042 (PRP43)
Spliceosome [BR:
ptkz03041
]
Complex A
U2 snRNP components
U2 related factors
JDV02_006042 (PRP43)
Complex B
JDV02_006042 (PRP43)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
JDV02_006042 (PRP43)
Ribosome biogenesis [BR:
ptkz03009
]
Eukaryotic type
90S particles
Helicases
JDV02_006042 (PRP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
HA2_N
AAA_19
SRP54
T2SSE
AAA
Flavi_DEAD
NB-ARC
Motif
Other DBs
NCBI-GeneID:
72067991
NCBI-ProteinID:
XP_047843379
LinkDB
All DBs
Position
5:join(1516467..1516783,1516862..1518731,1518803..1518919)
Genome browser
AA seq
767 aa
AA seq
DB search
MAYNSAKSEKRSSADVEDFSRKKAKKAATDAENAADRANPYLAHMHENDEADGYGPLAGM
RRHKTTAAEASRVEDAAINPFTGRTHSQQYFRILETRRDLPVHKQRQEFLDKYHSTQILV
FVGETGSGKTTQIPQYVVFDELPQQTGKLIACTQPRRVAAMSVAQRVADEMDVNLGEEVG
YSIRFEDMTGPKTMLKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLSTDILMALLKQ
ISMRRSDLKIIIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTAEPEKDYVEAAIRT
VLQIHASEPEGDVLLFLTGEDEIEDACRKISLEADELTREVDAGPLAVYPLYGTLPPHQQ
QRIFDPAPGPARKGGRPGRKIIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESL
LVSPISKASAQQRAGRAGRTKPGKCFRLYTEHAFKKELIEQTYPEILRSNLANTVLELKK
LGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDEGELTTLGSLASEFPLDPALAVMLI
SSPEFYCSNEILSITSLLSVPQIWIRPANNRKRADEMKAHFSHPDGDHLTLLNAYHAFKG
QGTTDAGRLKQWCHEHFLSFRHLSSADSVRAQLKRIMETHGLELISTPFEDKSYYTNIRR
ALLSGFFMQVAMKESSGKVYRTVKDDQAVLIHPSTVLRTEFDWVLYNEFVLTSKQYVRTC
TGIRPEWLLEIAPIYYDLDTFEPGEMKRSLQRAAEKKRRKEAMKAGR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcctacaactccgccaagtctgagaagcgctcaagcgctgacgtggaggacttctct
cgcaaaaaggccaagaaggccgcaaccgatgcagagaacgccgccgacagggccaacccg
tacctcgcccacatgcacgagaacgacgaggccgacggctacggccctctcgcgggcatg
cggcgtcacaagaccaccgccgcggaggcctcaagggtcgaggatgccgccatcaacccc
ttcaccgggcggacgcactcgcagcagtacttccggatcctggagacgcggcgagatctc
cccgttcacaagcagaggcaagagttcctcgacaagtaccactcgactcagatccttgtc
ttcgtcggtgagactggctcgggaaagacgacccagatcccccaatatgtcgtcttcgac
gagctgccccagcagacgggtaagctcattgcctgtactcaaccccgtcgagtcgccgcc
atgtctgtcgcgcagcgtgtggccgacgaaatggacgtcaacctgggcgaggaggtcggt
tacagcattcgtttcgaggacatgacgggtcccaagacgatgctcaagtacatgacggac
ggtatgcttcttcgcgaggctatgcacgaccacgaaatgtctcggtacagctgcatcatc
ctcgacgaagcccacgagagaactctctccaccgacatcctcatggctctgctgaagcaa
atatccatgcgacggtcagacctgaagattatcatcatgtctgctacgctcgacgcccaa
aagtttcaaaagtacttcaatgatgccccgctcctcgccgtgcccggtcgcacgcaccct
gtcgagatcttctacactgccgaaccagagaaggactacgtcgaggctgctatccgcacg
gttctccagatccacgcctccgagcccgagggtgacgtgctactcttcctaacaggcgaa
gacgaaattgaagacgcctgccgcaaaattagcctcgaggcggatgagttgacgagagaa
gttgacgcgggtccccttgcggtatacccgctgtacggtacactgcctccgcaccagcag
cagcgcattttcgatcccgcccctggtccggcacggaaggggggccggccgggacgcaag
attatcatctcgaccaacattgccgaaaccagtttgaccatcgacggtattgtctacgtt
gtggatcccggattcagcaagcaaaagatctacaacccgcgaattcgtgtcgagtccctg
ctcgtttcgccaatttccaaggcatcggcgcagcaacgcgcgggtcgtgcgggtcgtacc
aagcccggcaaatgcttcaggctctacactgagcacgccttcaagaaggagctcatcgag
cagacgtatcccgagattctgcggtccaacctggccaacacggtcctcgaactgaagaag
ctcggtgttgaggacctggttcactttgacctcatggacccaccggctcccgagaccatg
atgagggcactggaggaactcaactatctcgcctgcctggacgacgagggagagctgacg
acgctgggcagtcttgcgtcggagttcccgctggacccggccctggccgtgatgttgatc
tcgtctcccgagttttactgctccaacgagatcctgtccatcacgtcactgctgtctgtg
cctcagatctggattcggcccgccaacaaccgcaagagggcggacgagatgaaggctcat
ttcagccaccccgacggtgatcacttgaccctcctcaacgcataccacgccttcaagggc
cagggtacgacggatgcagggcgcctcaaacagtggtgccatgagcatttcctatccttc
cggcacttgtccagcgcggacagcgttcgggcccagctgaagcgcatcatggagacgcac
gggctggagctcatctccaccccgttcgaggacaagagctactacaccaacatccggcgg
gccctgctaagcggcttcttcatgcaggtggccatgaaggagagctcgggcaaggtgtac
aggaccgtcaaggatgatcaggcggttctgatccacccgtccacggtcctgcgcaccgag
ttcgattgggtcctttacaacgagtttgtgctgacatcgaagcaatacgtccgcacctgc
acgggaatccgcccggagtggttgttggaaattgcgccgatctactacgatctggacacg
tttgagccgggcgaaatgaagcgctccctccagcgcgctgcggagaagaagaggcgcaag
gaagccatgaaggcgggccggtga
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