Purpureocillium takamizusanense: JDV02_006464
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Entry
JDV02_006464 CDS
T08929
Symbol
SYF1
Name
(RefSeq) pre-mRNA-splicing factor syf1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JDV02_006464 (SYF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptkz03019
]
JDV02_006464 (SYF1)
03041 Spliceosome [BR:
ptkz03041
]
JDV02_006464 (SYF1)
Messenger RNA biogenesis [BR:
ptkz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
JDV02_006464 (SYF1)
Spliceosome [BR:
ptkz03041
]
Complex B
Other components
Prp19-related factors
JDV02_006464 (SYF1)
Complex C
JDV02_006464 (SYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_15
HAT
RPN7
Motif
Other DBs
NCBI-GeneID:
72068413
NCBI-ProteinID:
XP_047843851
UniProt:
A0A9Q8QIQ1
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All DBs
Position
6:join(52..102,156..2399)
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AA seq
764 aa
AA seq
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MARACAQLPRSYKLWKLFLNFRMKHVAELNPVTFAADYKKVNVLFERALTLLHKMPRIWE
MYLQFLMQQPVVTLTRRTFDRALRALPITQHNRIWALYLPFANAASGQTAVKVWRRYMQV
HPEDAEDFIELLINARAFTEAGKQYVDLLNNFRFSSKTGKGHYELWGEMVDMLVEHASEI
DVEHETGLDVEQIIRSGIARFTDQRGRLWAGLATYCIRRGSFERARDVFEEGITTVMTVR
DFTLVFDSYVEFEESVIGTLMELASTRAEQGLVDENADFELDVRMLRFEHLMDRRPFLLN
DVLLRQNPHNVAEWEKRVALWGENKAEVAQTYTDAISSINPKRAVGSFHQLWANYARFYE
RGGDLRNACIIMEKAVKVPFKSVAELADMWIEWAEMELRNEHFDDAIRIMAKAVQAPKRS
TVDYFDESLTPQQRVHKSWKLWSFYVDLVESVSTLSEVQKVYERIFELRIATPQTVVNYA
NLLEENHYYEESFKVYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQAVEDC
PPKFAKTIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPS
TRPIYERAITALPDAEAKDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNVDFWTKW
EQFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQQRAGSNAGDEASDAMAA
LERQVAAPEGFVAASSASQKVGHAAGEAARIANPEAIDINGLEE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgcatgtgctcagctaccgcggtcttataaactctggaaactttttctcaac
ttcagaatgaagcatgtcgccgagctcaacccagtaacgttcgcggcagactacaagaaa
gtcaacgtacttttcgagcgagcattaacgctgctgcacaagatgcccaggatttgggaa
atgtatcttcaattcctgatgcagcagccggtcgttacacttactcgccgaactttcgac
cgagctctcagggctcttccaatcacgcagcacaatcgcatatgggccttgtaccttcct
ttcgcgaacgccgcctcaggtcaaacagctgtcaaggtatggcgacgatatatgcaagtt
catccggaagatgccgaggacttcattgaactcctcatcaatgctagagccttcaccgaa
gctggaaagcagtatgtcgatcttctcaataattttcgcttttcgagcaaaactggcaag
ggccactatgagctctggggtgagatggtcgatatgctcgttgagcatgcctcagagatc
gatgtcgaacacgagactggactagatgtggagcagatcattaggagcggcatagcccgg
tttacggatcaaagaggcagactctgggccgggttagccacctactgcattcgtcgaggt
agctttgaacgggcacgagacgtcttcgaggagggcattaccacggtgatgaccgtccga
gatttcactctcgttttcgattcctatgtggaatttgaggaatcggttattggaacgttg
atggagcttgcatcgacgcgcgccgaacaaggcttggtggacgaaaatgccgactttgag
cttgatgttcggatgctccgtttcgagcatcttatggaccgtcgccctttccttctcaac
gatgtcctcctccgtcagaacccacacaatgtcgccgagtgggaaaaacgggtcgccctc
tggggtgaaaacaaagcagaggttgctcagacctacaccgacgccatatcatcaattaat
cccaagcgggccgtgggctctttccaccagctctgggcaaactacgcaaggttctacgaa
cgaggtggagatcttcgaaatgcgtgcatcatcatggagaaagctgtcaaagtgccgttc
aagtcggttgcggagctggccgacatgtggattgagtgggcggaaatggagcttcgcaac
gagcactttgacgacgcgatccgcatcatggccaaggctgtgcaagcccccaagaggtcc
accgtcgactactttgatgagagcctgacgccgcaacagcgcgtccacaaaagttggaag
ctctggagcttctacgtggatcttgtggagagtgtctctacgctgagcgaggtgcaaaag
gtttacgagaggatttttgagcttcgcatcgcgacaccacagactgttgtcaactacgcc
aatctgttggaggagaaccattattacgaggagtccttcaaagtctatgagcgaggcctg
gacctttttagctacccagtggcatttgagctgtggaatctgtacctgacgaaggccgtc
gaccgaaaaataggcattgagcgactgagggatcttttcgagcaagcggtggaggactgt
cccccgaagtttgccaaaacgatatatctcatgtatggcaacctcgaggaagagcgtggc
ctcgcgcggcacgcgatgcgtatctacgagagagcaacgcgagcggtcgcagacgaggat
cgtgcggacatgttcaacttctacatcaccaagtcggcctccaactttggcctgccgtca
acgcggccgatatacgaaagagccatcacggcgctccctgacgcagaagcgaaagacatg
tgtctgaaatttgcggatatggaaaagcgcctgggcgaaatcgacagagcgcgggccatt
tacggccatgcatctcaattttgcgaccctcggacgaacgtggacttctggacgaagtgg
gagcaatttgaggtacagcatggcaatgaggacacattcaaagaaatgctccggatcaag
aggagcgtccaggcccaatacaataccgatgtcaacttcattgcttcgcaggccttggct
cgcagccaacagagggctggcagcaatgccggggatgaggcgtcagacgccatggcagct
cttgagagacaggtcgcagcaccagaaggattcgtggctgcaagttcggcttcgcaaaag
gttggccacgctgcaggcgaagctgctcgaattgcaaacccagaggcaattgacattaat
gggctcgaggaatag
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