Purpureocillium takamizusanense: JDV02_006782
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Entry
JDV02_006782 CDS
T08929
Symbol
YHC1
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JDV02_006782 (YHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptkz03041
]
JDV02_006782 (YHC1)
Spliceosome [BR:
ptkz03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
JDV02_006782 (YHC1)
Complex B
JDV02_006782 (YHC1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-U1
Motif
Other DBs
NCBI-GeneID:
72068731
NCBI-ProteinID:
XP_047844198
UniProt:
A0A9Q8VDD5
LinkDB
All DBs
Position
6:join(985704..985713,985787..985792,985912..986013,986105..986257,986366..986437,986500..986795)
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AA seq
212 aa
AA seq
DB search
MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHIRNVVEYYQQIGHEKAQSVIDSITNSYAAE
GQAHNNPMLPQNQPGAKGAFPPPGFPAFPGAPGAPPPFPGMPGAPPGQFPPGVAPPPGAA
GRGMPPMPPFPGPPGANGMPPMPPPGGLPFSPPPGGFPFPPPGAGAPGGPGAPPPNFPGM
PNMTPPPGHGFPGGPPPPFPPGHSPAPGQDRR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagttcttttgcgactactgcgatgtgtaccttacgcacgactcgatgagcgtc
cgaaaggctcacaacagtggccgaaaccacatccgcaacgtcgtcgagtactaccagcaa
atcggccacgaaaaggcacagtccgtcatcgattccatcaccaactcgtacgccgccgag
ggccaggcccacaacaatcccatgctcccgcagaaccagcccggagctaagggcgcgttc
cctcctcccggcttccctgcgttccctggagctcccggagcccctcccccgttcccaggc
atgcctggcgcaccgcctggccagttccctcctggcgttgctcctccccccggcgcagct
ggccgcggcatgccccccatgccacccttccccggtcctccgggtgccaatggcatgccc
cctatgcctcctcccggcggtcttcctttctcgcctccccccggtggctttcccttccca
cctcctggtgctggcgcccctggtggccctggcgccccgcctcccaactttcccgggatg
cccaacatgacccctcccccgggccacggcttccccggtggccccccgccaccctttccc
ccgggacactctccggctcccggccaggacagacgatag
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