Parageobacillus thermoglucosidasius DSM 2542: AOT13_06900
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Entry
AOT13_06900 CDS
T04476
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ptl
Parageobacillus thermoglucosidasius DSM 2542
Brite
KEGG Orthology (KO) [BR:
ptl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptl03400
]
AOT13_06900
Enzymes [BR:
ptl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOT13_06900
DNA repair and recombination proteins [BR:
ptl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AOT13_06900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALF09743
UniProt:
A0AAN0YNH4
LinkDB
All DBs
Position
1392151..1395867
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AA seq
1238 aa
AA seq
DB search
MSNVFRPKTKESQWTDEQWKAIVADGRDILVAAAAGSGKTAVLVERIIQKITAKEDPVDV
DRLLVVTFTNASASEMKTRIAEAIERELDKQPNSLHLRRQLSLLNRASISTIHSFCLDVV
RKYYYLIDIDPVFRIADDTEAELLKEEVMEELLEEEYGKADNEPFFDIVDRYTGDRSDAE
LQEMILAIHEFSQSHPEPCKWLDQLVAMYDVDENDRLEEIPYISWMKRYVKMELDAAKRL
VSKALQLANLPGGPLPRAENYRDDLRIIAHLETLLERSWDELYEAFQSLSLSRLKSCRGD
EYDPQLLEEANSLRDQAKKKLESLRDNVFSLRPATWLHHMREMKPIVETIVRLVKRFAEM
FQARKREKGIVDFSDLEHYCLQILRHPDSADGQWLPSDAALDYRAQFIEVLVDEYQDTNM
VQEAILQLVAKGGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTADGTHPGMKIDLSNNF
RSRAEVLHGTNFIFKQIMGETVGEIEYDETAELKYGAVDYPDSEHAAPELIVIDRNSEEG
EESGELDANDLAAAQLEARMMAKKIKEIVSEPLHVFDRKAKRMRRAMYRDIVILLRSMTA
APQIMEEFRAQGIPVYADLSSGYFQATEIAVMLSLLKVIDNPYQDIPLASVLRSPIVGLN
ENELALIRIHEKKGTFYEAMMSFLHKAADNKEEEMLQQKLRLFYEQLHQWRTMARQRSLA
DVIWQLYRDTHFYDFVGGLPGGKQRQANLRALYDRARQYEATSFRGLFRFLRFIERLQER
GDDLGAARALGEQEDVVRIMTIHSSKGLEFPIVFVTGLARPFNTRDLYGSYLLDKELGFA
ARFVDPKLRISYPTLPQIAIRQKKRLDYLAEEMRILYVALTRAKEKLYLVAAVKDAQKEI
DKWKSTAAEEEWLLPDDVRAAARCYLDWIGRALIRHRDGQRLGDLSHVCREVASHPSVWR
ITIVPARELHDANQETERLDEQIATALKRGERVPTGGYAEEVQRLLSWKYAYEKETLVRA
KQAVSELKRHREIFGENADIMLLHSFSTPLFERPMFMREKTLTPAEKGTAMHIVMRHVDL
TVPITEEAVREQIAKLVQMELLTHEQAEAVNVSSIVAFFDTEIGKRLRTASEVHREIPFS
LALPAKEVYGDGVGKEGNILVQGVIDCLFADEKGLVLIDFKTDAVNRFAGGWREAKQVML
SRYQTQMQLYRRAVEQIWKMNVDECYLYLFDGSHLLPI
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtttttcgtccgaagacgaaggaaagtcagtggacggatgaacaatggaag
gctattgtggcggatggacgcgacattttagtagcagcagcggcgggatcgggaaaaacg
gcagtgcttgtcgaacggatcatccaaaaaattacagcgaaagaagacccggtggatgtc
gacaggcttcttgtcgtgacgtttacaaacgcttctgcgtcggaaatgaaaacgagaatt
gcagaagcgatcgagcgcgagctggacaaacagccaaattcgcttcatttgcggagacag
cttagtctgttgaaccgcgcttcgatttccacgattcactcgttttgtttggatgtcgtt
cgcaaatattactatttgatcgatatcgatcccgtatttcgcattgctgatgacacggaa
gcggaattgctgaaagaagaagtgatggaggaactgctcgaagaagaatatggaaaagca
gacaacgagccgttttttgacattgtggaccgctatacaggagatcggagcgacgccgag
ctgcaagaaatgattttagccatccatgagttttcccaatctcatcctgaaccatgcaaa
tggcttgatcagcttgtcgcaatgtatgatgttgatgaaaatgaccgattggaggaaatt
ccatatatttcttggatgaaaaggtatgtaaagatggaattggatgcggcgaaacgcctt
gtttcaaaggcgctgcagctcgcgaatttgcctgggggcccgctgccgcgcgccgaaaat
taccgcgatgatttgcggatcattgcccatttggaaacgttgttggaacgctcatgggac
gagctgtatgaagcgtttcagtcattatcgctatcacgtttaaaatcgtgccgcggtgat
gaatatgacccgcagctgctcgaagaagccaattcattgcgcgatcaagcgaaaaagaaa
ttagaatcgttgcgcgacaatgtgttttcgctccgaccggctacgtggcttcaccatatg
cgggaaatgaaaccaattgttgaaacgattgttcggctcgtaaaacggtttgcggaaatg
tttcaagcgcgtaaacgcgaaaaaggaatcgttgatttttccgatttggaacattattgt
ttgcaaattttgcgccatcctgattctgctgacgggcaatggcttccatctgatgccgct
ttggattatcgtgcccaatttatcgaagtgcttgtcgatgagtatcaagatacgaacatg
gtgcaagaagcgatattgcagcttgtggcaaaaggtggaaatttgtttatggtgggtgat
gttaagcaatccatttaccgcttccgcttggcggaaccgctgttatttttaagcaaatac
aaacggtttacggcagacggcacacacccgggaatgaaaatcgatttgtccaataatttt
cgcagccgcgcggaagttttgcacggcacgaactttatttttaagcaaattatgggggaa
acagtcggggagatcgaatatgacgaaacggcggaactaaaatatggcgccgttgactat
ccagacagtgagcatgctgcgccagagctgatcgtgattgaccggaatagcgaagaaggc
gaagaaagcggggaattggacgcaaacgatctggcggcagcccagctcgaagcgcgcatg
atggccaaaaaaataaaggagatcgtctctgagccgctgcatgtctttgatcgcaaagca
aagcggatgcgccgcgccatgtatcgggacatcgtcattctcctccgttcgatgacggct
gctccgcaaataatggaagaatttcgtgcacaaggtattccggtgtatgcggatttgtct
tccggatattttcaggcgacagaaatagctgtcatgctgtcgttattaaaggtgatcgat
aatccatatcaagatatcccgcttgcgtcggttttgcgttctcccattgtcggcttaaac
gaaaatgagttagcgctgatccgcattcatgagaaaaaaggcacgttttatgaggcgatg
atgtcatttttacataaagcggcggataacaaggaagaggaaatgctgcagcaaaaattg
cgccttttttacgaacagctgcatcaatggcggacgatggcgcggcagcgttcattggcg
gatgtgatttggcagctctatcgggatacgcacttttatgattttgtcggcggtttgcca
ggcggaaagcagcgccaggcgaatttgcgcgcgctttatgaccgggcgcgtcaatatgaa
gcgacgtcatttcgcgggctgttccgctttttgcggtttatcgagcgcctgcaagaacgc
ggcgatgatttaggagcagcgcgtgcgcttggcgaacaagaagatgttgttcgcattatg
acgatacatagcagcaaagggcttgaatttccgatcgtctttgtcactggtttggcgcgt
ccgtttaacacaagggatttatatggatcgtatttgcttgataaagaactcggttttgcg
gcgcgttttgttgatccgaagctgcgcatcagctatccgacattgccgcaaatcgcgatc
aggcagaaaaaacggctcgattatttggcagaagaaatgcgaattttatacgtcgcgcta
acgagggcgaaagagaagctatacttagttgcggcggtgaaagatgcgcaaaaggaaata
gacaaatggaaaagcactgcggccgaagaagagtggcttttgccggatgatgtccgcgct
gcggcgcgttgttatttagactggatcggaagggcgctcatccgccaccgcgacgggcaa
cgcttaggcgacttgtcccatgtttgccgagaagtcgcttcccatccatccgtttggcgc
ataacgatagttccggctagagaactgcatgacgccaaccaagaaacagagcggttggat
gaacaaatcgccactgctctgaagcggggagagcgtgttccaacagggggatatgcagaa
gaagtgcagcgtctcctttcatggaagtatgcatatgagaaagaaacgcttgtccgcgcg
aagcaggcggtctccgaattaaaacggcaccgtgaaattttcggggaaaacgcggatata
atgctgcttcattcattttccacgccgctgtttgaacggcctatgtttatgagagaaaaa
acattgacaccagcggaaaaaggaacagcgatgcacatcgtgatgcggcatgttgatttg
acagtgccgattacggaagaagcggttcgcgagcaaatagcgaaattagtgcaaatggag
ctgttaacgcacgagcaggcggaagcggttaacgtttcgagtattgttgcatttttcgat
acggaaatcggcaagcgcctccgcactgctagcgaagttcaccgggaaataccgtttagc
ttggcgctgccggcaaaagaagtgtacggagatggagttggcaaagaaggaaacattctc
gtccaaggtgtcattgactgtttgtttgccgacgaaaaagggcttgtattaatcgacttt
aaaaccgatgcagtaaacaggttcgcaggagggtggcgcgaagcaaaacaggtgatgctc
tcccgttatcaaacacaaatgcaattatatcgccgcgctgtggaacaaatttggaaaatg
aatgtggatgaatgttatttatatttatttgatggctctcatcttcttccgatttaa
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