Parageobacillus thermoglucosidasius DSM 2542: AOT13_06905
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Entry
AOT13_06905 CDS
T04476
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ptl
Parageobacillus thermoglucosidasius DSM 2542
Brite
KEGG Orthology (KO) [BR:
ptl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptl03400
]
AOT13_06905
DNA repair and recombination proteins [BR:
ptl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOT13_06905
Archaeal homologous recombinant proteins
AOT13_06905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
DUF3482
Motif
Other DBs
NCBI-ProteinID:
ALF09744
UniProt:
A0AAN0YMC4
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Position
1395930..1397111
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AA seq
393 aa
AA seq
DB search
MRILHTADWHLGRTLEGRSRLPEQEQFIDELADIVEKEKIDVVLMAGDVFDSVNPPAAAE
QLFYESLARLSDKGKRPVAVIAGNHDHPERISAAAKLVADYGILLIGWPDTAVYRIEVPA
RNEAMMLAPLPYPSESRLAELLSKEHSEISLRDRYDERIRHLFATMAASFSEKTVNVAMS
HIYVAGGSTSDSERPIEVGGAYTVSAASLPKQAQYVALGHLHRPQDVKRAETAARYSGSP
LAYSFSEAGYAKSVTIVDVKPGETAAVSEIPLSSGKPLVRWRATEGIAQVYRWCEEGKDA
SAWIDLEIHLSQPLSMEEIYRLRKLHSGFVHIRPVFPEKEEHIESDRREQLSLEEMFRRF
YERQTGGGKADDELVRLFLELVTEQEEEGETEE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattttacatacagccgactggcatttaggaagaacgctggaagggagaagccgg
ctgccggaacaggagcaatttatcgatgaacttgccgacatcgtcgaaaaagaaaaaatt
gatgtcgtgcttatggcgggagatgtgttcgattctgtcaacccgccggcggcagctgag
caattgttttatgaaagtctcgcccgcctttccgataaaggaaaacggcccgtcgccgtt
attgccggcaaccatgatcatcctgagcggattagcgctgccgcgaaattagtagccgat
tatggaatccttttgatcggctggccggatacggcggtctaccgcatcgaagtgccggcg
cgaaacgaagcgatgatgctcgctccgctcccgtatccttcggaatcccgtttagcggag
ctgctgtccaaagaacattcggaaatttctttgcgcgaccgatacgacgagcggattcgc
catttgtttgcgacgatggctgcttcgttttcggaaaagacggtaaacgtagccatgagc
catatttatgtcgcggggggaagcacatccgattcagagcggccgattgaggtcggaggc
gcctacacggtgtctgccgctagtttgccaaaacaagcccagtatgtcgcgctcggccat
ttgcatcggccgcaagatgttaaacgagcggagacagcggcgcgctattccggctccccg
cttgcctatagcttttccgaagcaggatacgccaaatcggttacgattgtcgatgtaaaa
ccaggggaaacggcggcggtttccgaaattccgttgtcgtctggcaaaccgctagtaaga
tggcgggcgacagaagggattgcccaagtatatcgctggtgcgaggaaggaaaagacgca
tctgcatggatcgatttagaaattcacctttcacagccgttatcgatggaagaaatttac
cggttgcgcaagcttcattctggttttgttcatattcgtccagtctttccagaaaaagaa
gagcatatcgagagtgacagacgagagcaattatcattggaagagatgttccgccgtttt
tatgaacgccaaacaggcggcggcaaagcggatgacgagcttgtccgcttgtttttagaa
ttagtgacggaacaggaagaagagggggagacggaagagtga
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