Parageobacillus thermoglucosidasius DSM 2542: AOT13_09935
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Entry
AOT13_09935 CDS
T04476
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptl
Parageobacillus thermoglucosidasius DSM 2542
Pathway
ptl03420
Nucleotide excision repair
ptl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOT13_09935
03430 Mismatch repair
AOT13_09935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptl03400
]
AOT13_09935
Enzymes [BR:
ptl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOT13_09935
DNA repair and recombination proteins [BR:
ptl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOT13_09935
MMR (mismatch excision repair)
Other MMR factors
AOT13_09935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
DEAD
AAA_12
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALF10314
UniProt:
A0AAN0YPF3
LinkDB
All DBs
Position
1994168..1996456
Genome browser
AA seq
762 aa
AA seq
DB search
MKNDVLRSEQQKLDETIQRLENATYQIYELSDTKSTTRRKTQYGKSNREQLKKAIEEPFF
GRLDVIYEGEDGERETLYFGKQEIIDQDNNQIVVDWRRPIASIYYNFTPENYIQKLTIKG
KKYPLEETITIRVERKREFSIKNGKIKSIIQKVASPSKDVNATFTEDGEEDIAIIDEFLK
EILQQNETTGYMKEIIATIQKEQDAAIRQPINRNVIIQGVAGSGKSSIALHRLSFLLFNN
KHISPEHVLILGPSKLFISSFQGLLPELDLEGIQQMTFQQLALQILQPVLKKEVNVSINW
YFENVLFTNESEEKKRIQFKGSSGLAQLLDHFVEEMKRQYIEQMQAIAIFDERLSREQLQ
EIWNGYSYLSFSKQMERFFQHVRNHFEHVMKTKVAHLTEQYESIIHTFLANGGLTKEEYK
DVTKKIKSVYDYKVQQLEKQWREGFSQWKKKMEFPSILSIYQRALSYELLTAFSHELDEE
IPLLFRDYHLEQITYFDLPPLLYIYLLLHEKPVSYAHIVVDEAQDFSYMHFAVLQKLTKT
MTILGDKDQSIYVGYGQDNWENVMNNLLKSDEDMLLTLETSYRSTKQIMEVANTILQNQY
GPSYRPITPFNRNGAAVQFVEVRSGQELLDQIVSTIHEWKQRYKRIAIIHKDEQKAMKLA
QYLKQEYKSDVVYVNLDENVSSQSISVLTSYHSKGMEFDAVILVNVNAESFPKDELHARL
LYVLVTRAQHELKIFYQNIPSSLLDGIISVEKKAVSKFDDIL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgatgtattacgctcggagcaacaaaaactagatgaaacgatccaaagactt
gaaaatgcgacttaccaaatatatgagttgtctgacacaaaaagtacaacgagacgcaaa
actcaatatggaaaaagcaatcgagaacaattgaaaaaggcaatagaagagccgtttttt
ggaagattggatgttatttacgaaggggaagacggtgaaagagaaacattatattttggt
aaacaagaaattattgatcaagataacaatcaaattgttgtcgactggcggcgaccgatt
gcgtctatttactataatttcacaccggaaaactatatacaaaaactaacgatcaaaggc
aagaaatatccactggaagaaacaataactataagggtggaacgaaagcgggaattttcc
atcaaaaacggaaaaattaaaagcattattcagaaggtcgcgtcgccaagcaaagacgta
aacgccacgtttacggaagatggcgaagaggacatagcgattattgatgaatttttaaaa
gagatattacaacaaaatgagacgactggatacatgaaagaaattattgccacaattcaa
aaggagcaggatgcggccattcggcagccgataaaccgaaatgtcatcatacaaggagtg
gcgggatctggaaagtcatccattgccctgcatcgcttatcatttttattgtttaataac
aaacatatttcaccggaacatgtactaattttaggaccttcaaagctgtttattagttca
ttccaaggattgcttccggagcttgatctggaaggcattcagcagatgacgtttcaacag
ctggcattacagattttacaaccggttctcaaaaaagaagtaaatgtttctattaattgg
tattttgaaaacgttttatttaccaatgaatccgaagagaagaagcgaatccaatttaaa
ggttcatcagggttggcgcaactgctcgatcattttgttgaagaaatgaaacggcaatat
atagaacaaatgcaagcgattgcgattttcgatgaacgactaagccgggaacaattgcag
gaaatatggaacggatacagttatttatcattttccaaacaaatggaacgttttttccaa
catgtccgcaatcactttgagcacgtcatgaaaacgaaagtcgcccatttgaccgaacag
tacgaatcgattatacatacgtttttagccaacggaggattgacaaaagaagaatacaag
gatgtgacgaaaaaaataaaatcggtatatgactataaagttcaacaattagagaaacag
tggagagaaggtttttcacagtggaagaaaaagatggagtttccaagtatactctccatt
taccaacgagcgctgtcatatgaattgttaaccgcgttttcgcatgagctggatgaagaa
attccgcttttatttcgcgattatcatctagaacagattacttattttgatttgccgcca
ttgctgtatatttatttgttgcttcatgagaagccagtttcctatgcgcacattgtggta
gatgaagcccaagatttcagctatatgcattttgctgtcctgcagaaacttacaaaaacg
atgacgatacttggtgataaggaccaatcgatttatgtcgggtacggacaggacaattgg
gaaaatgtaatgaacaacttgttaaaatcggatgaagacatgctattgacgctggagaca
agttatcggtcgactaaacagattatggaagtagccaatacgatcctccaaaatcagtat
gggccgtcataccgtccgattacaccgtttaaccgcaacggtgctgctgttcaattcgtc
gaggtaagatcgggacaagagctgcttgaccaaatcgtttcaaccatccatgagtggaaa
caacgttataagcgaatcgccattatacataaagacgagcaaaaagcgatgaagttggcg
caatatttaaaacaggaatacaaaagcgatgtcgtgtacgtcaaccttgacgaaaacgta
agctcccaatcgatttctgtccttacatcttatcacagcaaaggcatggaatttgatgcc
gttattttagtcaacgtcaacgcggagagcttcccaaaagatgaactgcatgcaagatta
ttatatgtgcttgttacccgtgcacagcacgagctgaaaatattttaccaaaacatcccg
tcgtcgcttttagacggtatcatttctgtggaaaagaaagcggtgtccaagtttgatgat
attttgtaa
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integrated database retrieval system
