Parageobacillus thermoglucosidasius DSM 2542: AOT13_16845
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Entry
AOT13_16845 CDS
T04476
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ptl
Parageobacillus thermoglucosidasius DSM 2542
Brite
KEGG Orthology (KO) [BR:
ptl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptl03019
]
AOT13_16845
03009 Ribosome biogenesis [BR:
ptl03009
]
AOT13_16845
Enzymes [BR:
ptl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AOT13_16845
Messenger RNA biogenesis [BR:
ptl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOT13_16845
Ribosome biogenesis [BR:
ptl03009
]
Prokaryotic type
rRNA helicases
AOT13_16845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CP_ATPgrasp_2
CMS1
DUF7117
Motif
Other DBs
NCBI-ProteinID:
ALF11549
UniProt:
A0AAN0YQL7
LinkDB
All DBs
Position
complement(3418454..3419761)
Genome browser
AA seq
435 aa
AA seq
DB search
MKETLFERFSFQPFIIEAIKELRFYKPTEIQERIIPIALRGKSAIGQSQTGTGKTHAYLL
PIIEKIDPDRKAVQAVITAPTRELATQIYHEILKITKFCPSDRQITARCFIGGTDKQKAI
EKLKTQPHIVVGTPGRINDLIREQALLVRTANTLVVDEADLMLDMGFIVDVDQIAARMPK
ELQMLVFSATIPEKLKPFLKKYMENPEYVHIAPKQVAAEKIEHVLVPLRSRDKVKLLHEM
LLAYNPYLAIVFTNTKKMADEVADKLIEKGMKVGILHGDLSPRERKKMMKQIRDLEFQYI
VATDLAARGIDIEGVSHVINYELPKDLQFYIHRAGRTARAGYTGMAATIYEPSDQDAITK
LEKMGIEFLHRDLIRGEWVDLPPWNRRSKREKQGGEIAQLLAKMKKAKQVKPGYKKKLLA
EMEKQKKRLRRLKKQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagacattgtttgagcggttttcatttcagccatttattattgaagcgatcaag
gagcttcgtttttataaaccgacggaaattcaagagcggatcattcccatcgctctccgc
gggaaaagcgcgatcggccagtcgcaaacaggaacggggaaaacgcacgcctatttgctg
ccgatcatcgaaaaaattgatccggaccgcaaagcagtgcaagcagtgattaccgcgccg
acgcgggaacttgcaacgcaaatctaccatgaaattttaaaaattaccaagttttgtccg
agcgatcggcaaattacggcccgctgctttattggcggaaccgataagcagaaggcgatc
gagaaattgaagacacagccgcatattgtagtcgggactccgggacgaatcaacgacctt
attcgcgaacaggcgctgctcgttcgcacagcaaacacgctcgtcgtcgacgaagcggac
ttaatgctggatatgggatttattgtggacgtcgaccaaattgctgcacgcatgccgaaa
gagttgcaaatgctcgtgttttccgcgacgattccggagaagttaaagccgtttttgaaa
aaatatatggaaaatccagaatatgtccatatcgcgccgaagcaagtggcggcggaaaaa
attgaacatgttcttgtgccgcttcgcagccgcgacaaagtgaagttgttgcatgaaatg
ttgcttgcgtataatccgtatttagcgatcgtatttaccaatacaaaaaagatggctgat
gaagtggcggacaagctgattgaaaaagggatgaaagtcgggattttgcacggcgattta
tcgccgcgcgagcgaaagaagatgatgaagcaaattcgcgatttggaatttcaatatatt
gttgctaccgatttggcggcccgcggcattgatattgaaggggtaagccatgtcattaac
tatgaattgccaaaagacttgcagttttacattcatcgcgccggacgcactgcgcgcgcc
ggctacaccggaatggcggcgacgatttacgagccgtcggaccaagatgccatcaccaaa
ttggaaaaaatggggattgagtttctgcaccgcgacctcatccgcggagaatgggtggat
ttgccgccttggaaccggcggagcaagcgggaaaagcaagggggagaaatagcgcagctg
cttgcgaaaatgaaaaaagcgaaacaagtcaagccgggttacaagaaaaaactgcttgct
gaaatggaaaaacaaaaaaagcggctgcggcgcttaaaaaaacaataa
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