Parageobacillus thermoglucosidasius DSM 2542: AOT13_18460
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Entry
AOT13_18460 CDS
T04476
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ptl
Parageobacillus thermoglucosidasius DSM 2542
Brite
KEGG Orthology (KO) [BR:
ptl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptl03016
]
AOT13_18460
Enzymes [BR:
ptl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AOT13_18460
Transfer RNA biogenesis [BR:
ptl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AOT13_18460
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ALF11853
UniProt:
A0AAN0YR84
A0AB38QVA5
LinkDB
All DBs
Position
complement(3749904..3750470)
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AA seq
188 aa
AA seq
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MKKTHYFIAVPIADEVKKQIADWKEGIAAAFPFRTWVHQQDYHITLAFLGYVPPAKIEEL
CQMIRQVAKRHAPFALSLSEIQMFGNRTAPRILWQGVEKEEKLFALQRDVYAACTAIGFS
LEKRPFTPHITIARKWQGNEGFQLRDLQMKPRVSATFPVGQIVLYQTHLDRTPKYEALAL
FPLSKDNV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacgcattattttattgccgttcctatcgctgatgaagtaaaaaaacaaata
gcagattggaaagaaggaatcgctgctgcgtttccgttccgcacatgggtgcatcaacaa
gattatcatataacattggcgtttttaggatatgttccgccggcaaaaatagaggaatta
tgccaaatgataaggcaagtggcaaaacgccatgctccatttgccttatcgttatcagaa
atacaaatgtttggcaatcgaacagccccgcgcattttatggcaaggagtggaaaaggaa
gaaaaactatttgcattgcaacgcgatgtgtatgccgcttgtaccgcgatcggattttcg
ctagaaaagcggccgtttactccgcacattacgattgcgcgcaaatggcaaggaaatgaa
gggtttcagttgagggatctgcaaatgaaaccaagagtaagcgcgacgttccccgtcggc
cagatcgtgttatatcaaacccatttagatcggacgccgaagtatgaggcgcttgctcta
tttccgctttccaaagataatgtctga
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