Paramecium tetraurelia: GSPATT00000086001
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Entry
GSPATT00000086001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptm03009
]
GSPATT00000086001
03036 Chromosome and associated proteins [BR:
ptm03036
]
GSPATT00000086001
Enzymes [BR:
ptm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSPATT00000086001
Ribosome biogenesis [BR:
ptm03009
]
Eukaryotic type
Pre-60S particles
Helicases
GSPATT00000086001
Chromosome and associated proteins [BR:
ptm03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
GSPATT00000086001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
DD_DDX21-DDX50
RRM_1
CMS1
UMPH-1
AAA_22
RRM_7
Motif
Other DBs
NCBI-GeneID:
5008810
NCBI-ProteinID:
XP_001423049
Genoscope:
GSPATT00000086001
UniProt:
A0BAT4
LinkDB
All DBs
Position
undetermined
AA seq
651 aa
AA seq
DB search
MLTRRKSSELIEPEIVKKVKGIDESNLKAYIKNKQTRKVLEGRGISNLFPIQQQCFETIY
NGDDIIGQDRTGSGKTLAYCLPILERIRGLGLKQNKNPYVLVLLPTRELAIQVTTEFNTI
LHKENEYRIYSIYGGTDLRNQIDQVRQGCEIVVGTPGRIQDLLERKVLKLDEIQVVVLDE
ADQMLNFGFQENIEKIMSYFNERKIQMLLFSATIPDWVKELSHKYMEANTKHINLIKRHE
TQTSTTVKHYALQCARNQLSGAIGDVVSVYGGRHARTIIFCETKRECNEIILHSKLPAET
QPLHGDIPQQQRTVTFEGFKNGKFKCLVATNVAARGLDFPQVDLIIQCNPPKDIESYIHR
SGRTGRAGKDGKDMGLIERVERVAKIKFIKISAPQHQDIIKASSRDLQTIKRLVDMFQPV
AQEIISRCDPVEALARALACVSGYKDKLQNRSMLGSFEGYITQVLRSSTPFQACGYIWKF
LKNNFSEQICNSIKGMKKIRNENGVAFDISEDVKEEFENQYQEISQNGYCRGIEIEQATS
LPDIIEEQFQSHQNYHQQPTVQVSQTVKKEQEIFIGGLDFKITEDEIKNEFKNRGVELFN
LRLLRGQDGQSKGSAFGVCRTKEMVSVAIKQNGTKFRGRNVRVNMANEKPK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaagaagaaaaagttctgaattaattgaaccagagattgttaaaaaggtcaaa
ggaatcgatgagagcaacttgaaagcatatataaaaaacaagcaaacaagaaaagtttta
gaaggtagaggcatctcaaatttattcccaattcaatagtaatgttttgaaacaatttac
aatggagatgatattatagggtaggatagaacaggttcaggtaaaactcttgcatattgc
ctcccaattcttgaaagaataagaggattaggattaaaataaaataaaaatccttatgta
ttagtattattaccaacaagagaattggcaatccaagtaactactgaatttaatactatt
ttacataaagaaaatgaatacagaatttatagtatatatggtggtacagatctaagaaac
taaattgattaagtgagataaggatgtgaaatagtagttggaacacctggaagaatatag
gatcttttggaaagaaaggttctaaaattagatgaaattcaagtggttgttttggatgag
gcagatcaaatgttgaattttggattttaagaaaatattgaaaagatcatgtcatatttc
aatgaaagaaaaatttaaatgctattatttagtgctactatacctgattgggtaaaggaa
ctatcacacaaatatatggaagccaataccaaacatattaatttaattaagagacatgag
acttaaacttcaacaactgtcaaacattatgccctctaatgtgcaagaaatcaattaagc
ggtgcaataggtgatgtagtttcagtttatggtggaagacatgcaagaactattatcttt
tgtgagactaaaagagaatgcaatgaaattattttgcattcaaaattaccagctgaaaca
taaccattacatggagacattccttaataataaagaacagtgacatttgaaggatttaaa
aatggaaaattcaaatgtttagttgcaaccaatgttgcagctagaggattggatttccca
taagtagatttaattatttaatgcaatcctcctaaagatattgaatcatatatccacaga
tcaggaagaacaggtagagctggaaaggatggaaaggatatgggtttgattgaaagagtg
gagagagtagctaaaataaaattcataaaaatttctgctcctcaacattaagatattatc
aaggcaagctcaagagatttataaactataaagagacttgttgatatgttttaacctgtg
gcttaagagatcatttctagatgtgatccagtagaagccttggctagagccttagcatgt
gtgagtggatataaagacaaactatagaatagatctatgttaggatcttttgagggatat
ataacataagtgttaagatcatcaactccattctaagcttgtggttatatttggaagttc
ttaaagaataacttttcagaatagatttgcaatagtattaagggtatgaaaaaaataaga
aatgagaacggtgttgcatttgatattagtgaagatgtcaaggaagaatttgaaaatcaa
tactaggagatatcacaaaatggatattgcagaggaattgaaattgaataagccactagt
cttccagatataattgaagaataattttaatcacatcaaaactatcattaataaccaaca
gtttaagtctcacaaacagttaaaaaggaataagaaatatttataggagggttagatttt
aagattacagaagatgaaattaaaaatgaattcaaaaatagaggagttgagttattcaat
ctcagattattaagaggctaggatggttaatcaaaaggatctgcttttggagtgtgtaga
actaaagaaatggtatcagtggctataaaataaaatggaactaaattcagaggaagaaac
gttcgtgtaaatatggcaaatgaaaaacctaaatga
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