KEGG   Paramecium tetraurelia: GSPATT00000268001
Entry
GSPATT00000268001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GSPATT00000268001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptm03009]
    GSPATT00000268001
Ribosome biogenesis [BR:ptm03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    GSPATT00000268001
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Utp13 Beta-prop_Aladin WD40_MABP1-WDR62_1st RMC1_N Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st WD40_like TRADD-like_N
Other DBs
NCBI-GeneID: 5009015
NCBI-ProteinID: XP_001423231
Genoscope: GSPATT00000268001
UniProt: Q6BFX5
LinkDB
Position
undetermined
AA seq 783 aa
MVKIVQATKLLKSRRLTRLKLSKLSLQSKQIVPNKKEQETKQVQIINEDQFITHIEPIKQ
LLPFYQGGKIQITNNVIYTCFNFCVQYLDKKIQHNQEEIANFCVSNLNDYIATFTKNYML
RYVRLNDHITQFTIKTDPLFAIDMQFSPEDVYLALGGTNCMVKIINVKKNQQSTEFRVSG
SVLKLQWIPIMRKLQVAIATDDRRISLFDLVANRILCGFVDFNSRITHIQFSQHMLVSSC
NKYIKFWDTSVQKLTETIEFDIEIETFIYFKNTLIIGTESGDLHIKQQNKKIAIDSQFNG
QQILKFINCNEKLYIITSELHIYITELVSGQIQQQKLLLGYNDEILDVKFIQNNQLLLAT
NSPFMKILNLDSMEVIAWKAHYSVIMCCEFIDDLIVTASKDNCVIIFKYKGFKQPIELHK
YSGHSDDVISIDVNSKYIASVSKDKSLKLWDLKNYQSEQSIKTVVAHEKEMNCVRFSPNN
KLIATSSQDRLIKLWDENLMNKMTLKGHKRGVWDIQFSPIEKILASASGDNTIKLWNLSD
GSIIKSFQGVAPQLKVQWLARGSELISTDSIGNIKLWNVKKQTCINTFSQHTGKIYALDI
KRDNQDIYIVTGANDSNLILWKDKTEQVTQQQQLQQHETKIKLQTFQDFMRDKLYLDAAF
IAFQNNYIKHFIQAVTQIYKQVDYDNVVSMLSQKMVKEDLLKFLQLLITLNQSKKTYQAA
QHLFYYSIKLINVNEFKDEKRELVKKLLQQLKYLTSKCFDRLESNYSSQFLIKFMIDKSK
IVV
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggttaaaatcgtataagcaaccaaattgcttaaatcaaggcgtctaactaggttaaaa
ctgagtaaactatcattgtaatctaaacaaattgtacctaataaaaaagaataagaaacc
aaataggttcaaattataaatgaggattaatttattacgcatatagaaccaattaaatag
ttattgcctttctatcaagggggtaaaatacaaataacaaataatgtgatatatacatgt
ttcaatttttgtgtgcaatatcttgataagaaaattcaacataatcaagaagaaatagca
aatttttgtgtgagcaatctaaatgattatatcgcaacatttacaaagaattatatgctc
agatatgttagattgaatgatcatatcacctaatttacaattaagacagatcctctattt
gccattgatatgtaatttagtccagaagatgtctacttggctttaggtggtacaaattgc
atggtcaaaattataaatgttaaaaagaaccaacaaagtactgaattcagagtcagtgga
agtgttctcaaattataatggattcctattatgaggaaattacaagtggcaattgccaca
gatgacagacgcatctcattatttgatttagtagcaaacagaatactgtgcggtttcgtt
gactttaatagtaggataacccatatttagtttagtcagcatatgttggtgtcaagttgc
aataaatacattaaattttgggacacaagcgtataaaaattgactgaaaccatagagttt
gatattgaaattgagacattcatttatttcaaaaatacccttatcataggtacagaatct
ggagatttacatattaaatagcaaaacaaaaaaattgctatagattcataatttaatggc
taataaatattgaaatttattaactgcaatgagaaattgtatatcataacaagtgaattg
catatttatattactgaattagtatctggacaaatacaatagtaaaaattattattagga
tataatgatgaaatactagatgtaaagtttattcaaaataaccaattgcttttggctaca
aattccccatttatgaagatattaaatttagatagcatggaggtcattgcatggaaggct
cattacagtgtgatcatgtgttgtgaatttattgatgatctaatagtaacagcatccaaa
gataattgcgtcattatattcaagtataagggattcaaacaacctatagagttacacaaa
tatagtggtcattctgatgatgtaatttcaatagatgtcaattccaaatatattgcatct
gtttcaaaagacaaatcacttaagttatgggatttaaagaattatcaatctgaataatct
ataaaaactgttgttgctcatgagaaagagatgaattgtgttcgattctcaccaaataat
aaacttattgccacatcttcctaagatagacttattaaattatgggatgaaaatttaatg
aataagatgacacttaaaggtcacaaaagaggagtctgggatatatagttttctccaatt
gaaaaaatattggcttctgcaagtggagacaatactattaagctctggaatcttagtgat
ggctctatcattaaatccttctaaggagtggctcctcaactaaaagtgtaatggcttgcc
agaggatctgaactaataagtactgattctattggtaatattaaattatggaatgtcaaa
aaataaacttgtattaatactttctcacaacatactggtaaaatttatgccttggatata
aagagagataatcaagatatttatatagtgactggagcaaatgattccaatctaattcta
tggaaagataagacagagtaagtgacttagcaataataactacaataacatgaaactaaa
ataaagttacaaacattccaagattttatgagagataaactatatttagatgcagcattt
attgcattttaaaataattatataaagcattttatttaggctgttacttaaatttataag
caagttgattatgacaatgttgtatctatgttatcttaaaaaatggtgaaagaagattta
ttaaaatttttataattgttgataacactaaattaaagcaagaaaacttattaggcagcc
taacatttattctattattcaataaaattaataaatgtaaatgaatttaaagatgaaaaa
agagagttagtgaaaaaattgctgtaataattgaaatatttgacatccaaatgttttgat
cgattggaaagtaattattcttcatagtttctaattaaatttatgattgataagtctaaa
attgttgtttga

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