Paramecium tetraurelia: GSPATT00000268001
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Entry
GSPATT00000268001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSPATT00000268001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptm03009
]
GSPATT00000268001
Ribosome biogenesis [BR:
ptm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GSPATT00000268001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Utp13
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
RMC1_N
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_like
TRADD-like_N
Motif
Other DBs
NCBI-GeneID:
5009015
NCBI-ProteinID:
XP_001423231
Genoscope:
GSPATT00000268001
UniProt:
Q6BFX5
LinkDB
All DBs
Position
undetermined
AA seq
783 aa
AA seq
DB search
MVKIVQATKLLKSRRLTRLKLSKLSLQSKQIVPNKKEQETKQVQIINEDQFITHIEPIKQ
LLPFYQGGKIQITNNVIYTCFNFCVQYLDKKIQHNQEEIANFCVSNLNDYIATFTKNYML
RYVRLNDHITQFTIKTDPLFAIDMQFSPEDVYLALGGTNCMVKIINVKKNQQSTEFRVSG
SVLKLQWIPIMRKLQVAIATDDRRISLFDLVANRILCGFVDFNSRITHIQFSQHMLVSSC
NKYIKFWDTSVQKLTETIEFDIEIETFIYFKNTLIIGTESGDLHIKQQNKKIAIDSQFNG
QQILKFINCNEKLYIITSELHIYITELVSGQIQQQKLLLGYNDEILDVKFIQNNQLLLAT
NSPFMKILNLDSMEVIAWKAHYSVIMCCEFIDDLIVTASKDNCVIIFKYKGFKQPIELHK
YSGHSDDVISIDVNSKYIASVSKDKSLKLWDLKNYQSEQSIKTVVAHEKEMNCVRFSPNN
KLIATSSQDRLIKLWDENLMNKMTLKGHKRGVWDIQFSPIEKILASASGDNTIKLWNLSD
GSIIKSFQGVAPQLKVQWLARGSELISTDSIGNIKLWNVKKQTCINTFSQHTGKIYALDI
KRDNQDIYIVTGANDSNLILWKDKTEQVTQQQQLQQHETKIKLQTFQDFMRDKLYLDAAF
IAFQNNYIKHFIQAVTQIYKQVDYDNVVSMLSQKMVKEDLLKFLQLLITLNQSKKTYQAA
QHLFYYSIKLINVNEFKDEKRELVKKLLQQLKYLTSKCFDRLESNYSSQFLIKFMIDKSK
IVV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaatcgtataagcaaccaaattgcttaaatcaaggcgtctaactaggttaaaa
ctgagtaaactatcattgtaatctaaacaaattgtacctaataaaaaagaataagaaacc
aaataggttcaaattataaatgaggattaatttattacgcatatagaaccaattaaatag
ttattgcctttctatcaagggggtaaaatacaaataacaaataatgtgatatatacatgt
ttcaatttttgtgtgcaatatcttgataagaaaattcaacataatcaagaagaaatagca
aatttttgtgtgagcaatctaaatgattatatcgcaacatttacaaagaattatatgctc
agatatgttagattgaatgatcatatcacctaatttacaattaagacagatcctctattt
gccattgatatgtaatttagtccagaagatgtctacttggctttaggtggtacaaattgc
atggtcaaaattataaatgttaaaaagaaccaacaaagtactgaattcagagtcagtgga
agtgttctcaaattataatggattcctattatgaggaaattacaagtggcaattgccaca
gatgacagacgcatctcattatttgatttagtagcaaacagaatactgtgcggtttcgtt
gactttaatagtaggataacccatatttagtttagtcagcatatgttggtgtcaagttgc
aataaatacattaaattttgggacacaagcgtataaaaattgactgaaaccatagagttt
gatattgaaattgagacattcatttatttcaaaaatacccttatcataggtacagaatct
ggagatttacatattaaatagcaaaacaaaaaaattgctatagattcataatttaatggc
taataaatattgaaatttattaactgcaatgagaaattgtatatcataacaagtgaattg
catatttatattactgaattagtatctggacaaatacaatagtaaaaattattattagga
tataatgatgaaatactagatgtaaagtttattcaaaataaccaattgcttttggctaca
aattccccatttatgaagatattaaatttagatagcatggaggtcattgcatggaaggct
cattacagtgtgatcatgtgttgtgaatttattgatgatctaatagtaacagcatccaaa
gataattgcgtcattatattcaagtataagggattcaaacaacctatagagttacacaaa
tatagtggtcattctgatgatgtaatttcaatagatgtcaattccaaatatattgcatct
gtttcaaaagacaaatcacttaagttatgggatttaaagaattatcaatctgaataatct
ataaaaactgttgttgctcatgagaaagagatgaattgtgttcgattctcaccaaataat
aaacttattgccacatcttcctaagatagacttattaaattatgggatgaaaatttaatg
aataagatgacacttaaaggtcacaaaagaggagtctgggatatatagttttctccaatt
gaaaaaatattggcttctgcaagtggagacaatactattaagctctggaatcttagtgat
ggctctatcattaaatccttctaaggagtggctcctcaactaaaagtgtaatggcttgcc
agaggatctgaactaataagtactgattctattggtaatattaaattatggaatgtcaaa
aaataaacttgtattaatactttctcacaacatactggtaaaatttatgccttggatata
aagagagataatcaagatatttatatagtgactggagcaaatgattccaatctaattcta
tggaaagataagacagagtaagtgacttagcaataataactacaataacatgaaactaaa
ataaagttacaaacattccaagattttatgagagataaactatatttagatgcagcattt
attgcattttaaaataattatataaagcattttatttaggctgttacttaaatttataag
caagttgattatgacaatgttgtatctatgttatcttaaaaaatggtgaaagaagattta
ttaaaatttttataattgttgataacactaaattaaagcaagaaaacttattaggcagcc
taacatttattctattattcaataaaattaataaatgtaaatgaatttaaagatgaaaaa
agagagttagtgaaaaaattgctgtaataattgaaatatttgacatccaaatgttttgat
cgattggaaagtaattattcttcatagtttctaattaaatttatgattgataagtctaaa
attgttgtttga
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