KEGG   Paramecium tetraurelia: GSPATT00001014001
Entry
GSPATT00001014001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GSPATT00001014001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptm03021]
    GSPATT00001014001
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00001014001
Transcription machinery [BR:ptm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     GSPATT00001014001
   Coactivators
    SAGA/TFTC/STAGA complex
     GSPATT00001014001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     GSPATT00001014001
    STAGA complex
     GSPATT00001014001
    TFTC complex
     GSPATT00001014001
    SAGA complex
     GSPATT00001014001
    SLIK complex
     GSPATT00001014001
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd PEP5_VPS11_N ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 DUF6243 Ureidogly_lyase US2
Other DBs
NCBI-GeneID: 5024482
NCBI-ProteinID: XP_001438697
Genoscope: GSPATT00001014001
UniProt: A0CKI3
LinkDB
Position
undetermined
AA seq 640 aa
MLQIPKKSITYEKILADFYQQFISQEIASQRPQIEFLHFLCSSFMMEKLFQNYQESLQKK
EDDQISARKELNDFITYMVNQNAAYLNEYIRDELLILSKNRHDDQYLSGYSQFYKYCSIT
TTSIMYEKINYILEYLKHQNQIFQDFKNKLKFNQYSNSDCFTTNRYATLSGLFYFNKQIG
SMEVNAKDDKLRDLRLIEENMRTKEKYFNTFIEDDWLRIIVQIEKCQKSHLDPLSQQDFS
EIQQLIEQKQLPYQIANQMKQEVIKKLQQRKQQQQQSQENNNEKQVKYSQLIKYKLSHDT
KLVECLLNQQKNLLGIKLQDLPNVISYIQISKFCKIICCGCYDGNILIYDMNELKQNRQN
RLLCNPSFEMHIHEGPVTAISILYDENYIISVSVDLTIKFSCLKSRQPLVVYKGHLQTIW
HLAFAPMGYWFASASSDGTALLWATDQNQCIRIFGPVMNQVKLVEFVPSVEYVVTAEENR
IFRIWSIDKAECLYISFMDGNITCMNVSFTGQFLCVGCDSGSVVLYYLPMTKLLKEKIYL
QRSDFHSANGRDYIRSVSISLDETTLMCCNSNRIGFFNISDLMKKTSEDVFKGLEQSIKS
IEYEKNNWSRNAIPIELLELQDYIHLAQYVCNGFALYVCK
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgctttaaataccgaagaaatccatcacttatgagaagattttagctgatttttattag
caatttatctcttaggaaatagcaagttagagaccacagattgaatttttgcatttctta
tgcagttcattcatgatggaaaagctatttcaaaattatcaggaaagtttgtaaaagaag
gaggatgactagatatctgcacgaaaagaattaaatgatttcattacatacatggtcaat
tagaatgcagcatatttaaatgagtatattcgtgatgaattattaatattatccaagaat
cgacatgatgattagtatttgagcggttatagtcaattttacaaatactgttcaataact
actacctcaataatgtatgagaaaataaattacatcttggaatatttaaaacattaaaat
caaatattccaagatttcaaaaataaactcaagtttaatcaatattcaaacagcgattgc
ttcactacaaacaggtatgcaactctgagtggactattctatttcaataaataaatagga
tcaatggaggtaaacgcaaaggatgacaaattaagggatctcagattgattgaagaaaac
atgaggaccaaagaaaaatactttaatacctttattgaagatgattggctcagaatcatt
gtttagatagaaaaatgttaaaagtctcatcttgatcctctgagtcaataggatttctca
gaaattcagtaactgattgaatagaagcaattgccctattaaatcgcaaatcaaatgaaa
caagaagtgataaagaaattataatagagaaaacagcaacaacaacaatcataagaaaat
aacaatgagaaacaagtcaaatattctcaattaatcaaatacaaattatcacatgacaca
aaactagttgagtgtttattaaatcaacaaaagaatttacttggcatcaaattacaagat
ctgcccaatgtgatctcctacatctaaataagtaaattctgcaaaataatatgttgtggt
tgttatgatggtaacatactaatttatgacatgaatgaattaaaatagaatagataaaat
aggctactttgcaatcctagttttgaaatgcatatccacgaaggacctgtaactgccatt
agcattctctatgatgagaattacatcatttcagtctcagttgatttaactataaaattc
tcatgcttaaaatctagacaacctttggtagtttacaaaggacacttacaaactatctgg
catttagcctttgctcctatgggctattggtttgcaagtgcctcttcagatggaactgct
ctcttatgggctactgattaaaattaatgcattaggatatttggacctgtgatgaatcaa
gtaaaattagtagaatttgttccgtctgttgaatatgtagttactgcagaagaaaaccga
atctttagaatctggtctattgataaggctgaatgtctttatatctcatttatggatgga
aatatcacgtgtatgaatgtgtcattcactggtcaattcttatgtgttggatgcgattct
ggatcagtggttttatactatttgcctatgacgaaactcctaaaagagaagatctattta
caaagaagtgacttccacagtgccaacgggagagattacatcaggtcggtgtccatcagt
ctggatgaaacaaccttgatgtgttgtaactcaaatagaataggcttcttcaatatatct
gatttgatgaagaagacaagtgaagatgtctttaagggtttggaataaagcattaaatca
attgaatatgagaaaaataattggagcagaaatgccattcccattgagttattagaattg
caggattacattcatttggcccagtatgtatgtaatggctttgctctatacgtttgtaaa
tga

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