Paramecium tetraurelia: GSPATT00001014001
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Entry
GSPATT00001014001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSPATT00001014001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptm03021
]
GSPATT00001014001
03036 Chromosome and associated proteins [BR:
ptm03036
]
GSPATT00001014001
Transcription machinery [BR:
ptm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
GSPATT00001014001
Coactivators
SAGA/TFTC/STAGA complex
GSPATT00001014001
Chromosome and associated proteins [BR:
ptm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
GSPATT00001014001
STAGA complex
GSPATT00001014001
TFTC complex
GSPATT00001014001
SAGA complex
GSPATT00001014001
SLIK complex
GSPATT00001014001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
DUF6243
Ureidogly_lyase
US2
Motif
Other DBs
NCBI-GeneID:
5024482
NCBI-ProteinID:
XP_001438697
Genoscope:
GSPATT00001014001
UniProt:
A0CKI3
LinkDB
All DBs
Position
undetermined
AA seq
640 aa
AA seq
DB search
MLQIPKKSITYEKILADFYQQFISQEIASQRPQIEFLHFLCSSFMMEKLFQNYQESLQKK
EDDQISARKELNDFITYMVNQNAAYLNEYIRDELLILSKNRHDDQYLSGYSQFYKYCSIT
TTSIMYEKINYILEYLKHQNQIFQDFKNKLKFNQYSNSDCFTTNRYATLSGLFYFNKQIG
SMEVNAKDDKLRDLRLIEENMRTKEKYFNTFIEDDWLRIIVQIEKCQKSHLDPLSQQDFS
EIQQLIEQKQLPYQIANQMKQEVIKKLQQRKQQQQQSQENNNEKQVKYSQLIKYKLSHDT
KLVECLLNQQKNLLGIKLQDLPNVISYIQISKFCKIICCGCYDGNILIYDMNELKQNRQN
RLLCNPSFEMHIHEGPVTAISILYDENYIISVSVDLTIKFSCLKSRQPLVVYKGHLQTIW
HLAFAPMGYWFASASSDGTALLWATDQNQCIRIFGPVMNQVKLVEFVPSVEYVVTAEENR
IFRIWSIDKAECLYISFMDGNITCMNVSFTGQFLCVGCDSGSVVLYYLPMTKLLKEKIYL
QRSDFHSANGRDYIRSVSISLDETTLMCCNSNRIGFFNISDLMKKTSEDVFKGLEQSIKS
IEYEKNNWSRNAIPIELLELQDYIHLAQYVCNGFALYVCK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgctttaaataccgaagaaatccatcacttatgagaagattttagctgatttttattag
caatttatctcttaggaaatagcaagttagagaccacagattgaatttttgcatttctta
tgcagttcattcatgatggaaaagctatttcaaaattatcaggaaagtttgtaaaagaag
gaggatgactagatatctgcacgaaaagaattaaatgatttcattacatacatggtcaat
tagaatgcagcatatttaaatgagtatattcgtgatgaattattaatattatccaagaat
cgacatgatgattagtatttgagcggttatagtcaattttacaaatactgttcaataact
actacctcaataatgtatgagaaaataaattacatcttggaatatttaaaacattaaaat
caaatattccaagatttcaaaaataaactcaagtttaatcaatattcaaacagcgattgc
ttcactacaaacaggtatgcaactctgagtggactattctatttcaataaataaatagga
tcaatggaggtaaacgcaaaggatgacaaattaagggatctcagattgattgaagaaaac
atgaggaccaaagaaaaatactttaatacctttattgaagatgattggctcagaatcatt
gtttagatagaaaaatgttaaaagtctcatcttgatcctctgagtcaataggatttctca
gaaattcagtaactgattgaatagaagcaattgccctattaaatcgcaaatcaaatgaaa
caagaagtgataaagaaattataatagagaaaacagcaacaacaacaatcataagaaaat
aacaatgagaaacaagtcaaatattctcaattaatcaaatacaaattatcacatgacaca
aaactagttgagtgtttattaaatcaacaaaagaatttacttggcatcaaattacaagat
ctgcccaatgtgatctcctacatctaaataagtaaattctgcaaaataatatgttgtggt
tgttatgatggtaacatactaatttatgacatgaatgaattaaaatagaatagataaaat
aggctactttgcaatcctagttttgaaatgcatatccacgaaggacctgtaactgccatt
agcattctctatgatgagaattacatcatttcagtctcagttgatttaactataaaattc
tcatgcttaaaatctagacaacctttggtagtttacaaaggacacttacaaactatctgg
catttagcctttgctcctatgggctattggtttgcaagtgcctcttcagatggaactgct
ctcttatgggctactgattaaaattaatgcattaggatatttggacctgtgatgaatcaa
gtaaaattagtagaatttgttccgtctgttgaatatgtagttactgcagaagaaaaccga
atctttagaatctggtctattgataaggctgaatgtctttatatctcatttatggatgga
aatatcacgtgtatgaatgtgtcattcactggtcaattcttatgtgttggatgcgattct
ggatcagtggttttatactatttgcctatgacgaaactcctaaaagagaagatctattta
caaagaagtgacttccacagtgccaacgggagagattacatcaggtcggtgtccatcagt
ctggatgaaacaaccttgatgtgttgtaactcaaatagaataggcttcttcaatatatct
gatttgatgaagaagacaagtgaagatgtctttaagggtttggaataaagcattaaatca
attgaatatgagaaaaataattggagcagaaatgccattcccattgagttattagaattg
caggattacattcatttggcccagtatgtatgtaatggctttgctctatacgtttgtaaa
tga
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integrated database retrieval system