Paramecium tetraurelia: GSPATT00001699001
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Entry
GSPATT00001699001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSPATT00001699001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptm03009
]
GSPATT00001699001
Ribosome biogenesis [BR:
ptm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GSPATT00001699001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR41
DSE1_N
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
KNTC1_N
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
WD40_2
WDR54
TRM82_WD
P_gingi_FimA
Motif
Other DBs
NCBI-GeneID:
5031840
NCBI-ProteinID:
XP_001446055
Genoscope:
GSPATT00001699001
UniProt:
A0D6J1
LinkDB
All DBs
Position
undetermined
AA seq
828 aa
AA seq
DB search
MVKAYFGYKFETLFGSIGNNGGVIINDIAYTIVDQYLLLLNIKTQEIIQQIVIEGKNIKI
TKIAIKDNTLAIGYHDGEIIIYNLIDNEVQCRFFNHQSEITQLVFLSEAVLISGSCDTSI
IVWDLADQQLQFRLIGHSNQITALDIISLEDQSLAITQQFIVSGSKDGLVKIWDLNLECS
IATLSSMHSEVTCLCVYENYLLICTNSDEVLIKSCQLISGKCQIDNDGIIKRQSFIRAVQ
CQFVQQKLLILNNEKKIEVYKSKQGKKLQKAENFSQSLIYSTVISQLNKIVYFQAMVFKN
LLKIYIFTSDNQIVIKELNNDNVDENNNVAIQQITGQVKQIKLTQNDHKLVVIASNKCYQ
FDNETAQQVNCLTNTSNLTSLCILPKNKYFMVGDEQGTLYLVDMNQNEIVFEQKIHNSNI
NSIECHENCKAFNGLVIMTTEIDKKVNFVELFFNKTQKCLEFQVVNTIYLKENIRSAQFS
YDGNYYAFAQMNNIVSIYYCDSHKLYLELYGHSLPVLTFAYTSDDTIVISAGADKSIKLW
ATDFGNCKKTLKAHTAEVIQIKTVNETHYFFSGCKDNIIKYWDGDTYQLILQFNEALAGV
QSMAVGCIGDLFYSATKNGVIRKYVQTKEQIFVSEEEEKRLQETLMQELQNKNKQQTGFD
QGLDQVKKDLTLVQIGQQKLLETEQLMDILEKIKQYRETIDQGEVPNEDLFYNKNVTEYL
FDNLQNSDLSSLMKFLHHQHLVTLIDEMNQDLALKQYPIIINKLITYIFNKVDGFGFNSH
EIMMKVINIRTQLQIYFKKEKKIAGYNLDILNLMIQDISKNQDDFIFE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagcctattttggatataaatttgagactctttttggtagtattggcaacaat
ggaggagtaataataaacgatatcgcatatacaatagtagattaatatttgcttttgcta
aatataaagacacaagagattatttaataaatagtaattgaaggtaagaacataaaaatt
acaaaaattgctataaaagacaacactttggcaataggatatcatgatggtgaaataata
atatataatctgattgataatgaagtttaatgcagattttttaaccatcagagtgaaata
acctaattggtatttttgagtgaggcagttttaataagtggaagttgtgacacttctatt
attgtttgggatctagcagattaataattgtaatttagattgataggacattcaaattaa
ataactgccttggatatcattagccttgaagattaaagtcttgctataacctaataattc
attgtatcaggtagtaaagatggactcgtcaaaatatgggatttgaatctagaatgttct
atagccactctatcaagtatgcatagtgaagtcacatgtttatgtgtctacgaaaattat
ttgcttatctgcaccaattctgatgaagttcttattaaatcatgttaattgatttcaggc
aagtgtcagattgataatgatggaattattaaaagataatcctttattagagcagtccaa
tgccaattcgtttaataaaaattgttgattttaaataatgaaaagaaaattgaagtttat
aagtcaaaataaggaaagaagctacaaaaagctgaaaactttagtcaatccctaatttat
agcactgtcatatcttaattgaataagattgtatatttttaagcaatggtatttaaaaac
ctattgaaaatctatatattcacatctgacaattaaatagtaatcaaagaattaaataat
gataatgtggatgaaaataataatgtagcaatttaatagattacaggtcaggtcaaataa
attaaattaacttaaaatgatcacaaattggtagtaatcgcatcaaacaaatgttattaa
tttgataacgaaacggcttagtaggtcaactgtctcactaatacaagtaatttaacttct
ttatgcattttgccaaaaaataaatattttatggtaggggatgaataaggaaccttatat
ttggttgatatgaatcaaaatgaaattgtttttgaatagaaaattcataattcaaatatt
aacagtattgaatgccatgagaattgtaaggcatttaatggtttagtaataatgacaact
gaaatagataagaaagtgaattttgtcgagttattttttaataaaacttaaaaatgcttg
gaattctaagtggttaatacaatctatttaaaggaaaatattagaagtgcttaattttca
tatgatggaaattactatgcatttgcccaaatgaataatattgtatcaatctattactgt
gactctcataaattgtatcttgaattatatgggcattcattacccgttttaacttttgct
tatacttcagatgatacaatagtaatttcagcaggtgcagataagagcattaaattatgg
gcaactgattttggaaattgtaagaaaacccttaaagctcatacagcagaagttatttaa
ataaaaacagtaaatgaaactcactatttctttagtggatgcaaagacaatatcattaaa
tattgggatggagatacatattaattaatattgcaatttaatgaagcattagctggagta
taatcaatggctgttgggtgtattggagatttgttttattcagcaacaaaaaatggagtc
attagaaaatatgttcaaaccaaagaataaatttttgtttcggaagaggaggaaaagaga
ttgcaagaaactttgatgtaagaattataaaataagaataaataataaactggatttgat
taaggcttagattaagtcaaaaaagatttaactttagtgtagattggataataaaaacta
ttagaaactgaataattaatggacattctggaaaagattaaacagtatagagaaactatt
gattaaggtgaggttccaaatgaagatctattttataataaaaatgtcactgagtattta
tttgataatctctaaaattcagacttgagttcccttatgaaatttttgcatcatcaacat
ttggtaactttgatagacgaaatgaattaagatttagcattaaaatagtatcccatcatc
attaataagttaataacttatatctttaataaggttgatggatttggattcaattcacat
gaaattatgatgaaagtgataaatatcagaacttaattacaaatctattttaagaaagag
aagaaaattgctggatacaatcttgacattctcaatttaatgatttaagatataagtaaa
aattaagatgattttatttttgaatga
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integrated database retrieval system