KEGG   Paramecium tetraurelia: GSPATT00002202001
Entry
GSPATT00002202001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03082  ATP-dependent chromatin remodeling
ptm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GSPATT00002202001
   03083 Polycomb repressive complex
    GSPATT00002202001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00002202001
Enzymes [BR:ptm01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     GSPATT00002202001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     GSPATT00002202001
   HDAC complexes
    Sin3A-HDAC complex
     GSPATT00002202001
    BRAF-HDAC complex
     GSPATT00002202001
    REST complex
     GSPATT00002202001
    SHIP complex
     GSPATT00002202001
    MiDAC complex
     GSPATT00002202001
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     GSPATT00002202001
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    GSPATT00002202001
  Chromatin remodeling factors
   NuRD complex
    GSPATT00002202001
SSDB
Motif
Pfam: Hist_deacetyl NIL Mre11_C_bact
Other DBs
NCBI-GeneID: 5035255
NCBI-ProteinID: XP_001449470
Genoscope: GSPATT00002202001
UniProt: A0DGA6
LinkDB
Position
undetermined
AA seq 424 aa
MNLFKQKVTYYYDEEFGTFNYSTTHPMKPLRVAITDDLVGHYGLKQYMNCIVQDQSFVQT
YIKRVDEDVLTQFHSEEYIDLIKIITPENKCQHEDQLYRFNFMEDCPVLDRLFDFCLCQT
SGSVGAACVIADQKSNIAINWSGGLHHAKQSEASGFCYVNDCVLGILELLKTYQRVLYID
IDIHHGDGVEEAFYLTDRVMTCSFHKFKEYFPGTGHIDDIGHDKGKYYAVNFPLNEGLND
DSIQLIFKPVIDSIMENFRPDVVMLQGGTDSLSGDRLGCFNLSIKGHGSCTEYLKKFNVP
IIMVGGGGYTLRNVPRCWTYETSLALNVPIPDNIPDESDYKVYFGPEYQITFTNLQYGGI
EFKGIFREKHILDNLKQIQPGCAQIDHYAIGKESRQKVDYQELFSSYNDKREEMQLEQNQ
DQQD
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgaatctcttcaagtagaaagtgacttactattacgatgaggaatttggtacatttaat
tattcaacaactcatccaatgaaacctttgagagtagccataacagatgacttagtgggc
cattatgggctaaaataatatatgaattgtattgtttaggatcaatcttttgttcaaacc
tatatcaaaagggtagatgaggacgtattgacttaatttcattctgaagagtatattgat
ttaataaaaataattacaccagaaaataagtgtcaacatgaagatcaactttatagattc
aatttcatggaagattgtccggtcttagatagattatttgatttttgtttgtgttaaact
tctggatcagttggggctgcttgtgttatagcagattagaagagcaacatcgctataaat
tggagtggtggattacatcacgcgaaataaagtgaagcaagtggattttgttatgttaat
gactgtgtattaggaatattggagttattgaaaacatattaaagagttctttatattgac
atagatattcatcatggagatggagtagaagaagcattttacctgactgatagagttatg
acttgctcttttcataaatttaaggaatactttcctggaactggacacattgatgatatt
ggacatgataaaggaaagtactatgcagttaattttccattgaatgaaggcttaaatgat
gattccatttaattaatattcaaacctgtgattgacagtattatggaaaattttagacca
gatgttgtaatgttgcaaggaggaactgatagtcttagtggagataggttgggatgcttt
aatttgagcataaaaggtcatggttcttgcactgaatacctcaagaaattcaatgtccct
atcataatggtaggcggtggaggatatacattacgaaatgttcctcgttgttggacttat
gaaacttcccttgccttaaatgtgccaattcctgataatattcctgacgaatctgattac
aaggtttactttgggcctgagtatcaaattacatttaccaatctctaatatggaggaata
gaattcaaaggaatatttagagaaaaacatatcttagacaacctaaaacaaatataacca
ggttgtgcataaatagatcattatgcaatcggcaaagagagcagataaaaagttgactat
caggaattattctcatcatacaatgataaaagagaagaaatgcaattagaataaaatcaa
gactaataagattga

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