KEGG   Paramecium tetraurelia: GSPATT00002998001
Entry
GSPATT00002998001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSPATT00002998001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00002998001
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00002998001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSPATT00002998001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GSPATT00002998001
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40 Beta-prop_WDR36-Utp21_2nd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd EIF3I WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_WDR41 Beta-prop_DCAF4 PH_37
Other DBs
NCBI-GeneID: 5041212
NCBI-ProteinID: XP_001455427
Genoscope: GSPATT00002998001
UniProt: A0DYB3
LinkDB
Position
undetermined
AA seq 357 aa
MDSVSEIRFGNNDIFATGAWDGYIRFYSILSQHGIQTQIALDFKSVIDCQEPQVHNLISR
VLSISWKRDMTMIFAALADNTVRVYDIKTGQNIILGYHDDCPARQVFWNDDLQALVSLGF
DKKLRLWSLKQNTMGMKPSPIYELNLTSIPTVGEQDQNERMFAYADVDCKIKWFSWDKIR
GSLNSTVSRNIFEIEDSKLGNRSQISALAISHNSKQMGYCSVDGRGAVVELTDRLEALNR
IVYKCHKREEDLKTSFKTEKINTYYAVNSFQFNSRSYDWVSTSSSDSTIIFWDLKKKNKI
TTIPFDAPVIASQVSPDGYFLAYATGYDWGQGLDGIDNRFANNVGAIFIEKHQLLYV
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggattcagtctcagaaattagattcggaaataatgatatatttgctactggagcatgg
gatggctatatacgcttctattcaattcttagtcaacatggcattcagacttaaatagct
cttgactttaaaagcgtaattgattgctaagaaccgtaagtccataatcttatatctaga
gtactttcaattagttggaaaagagacatgacaatgatatttgcggctttggctgataat
acagttagggtgtacgatataaaaacaggtcagaatataatcttgggatatcatgatgat
tgcccagcaagataagtattttggaatgatgacttgtaagcattggtttctttgggtttt
gataagaagttaagattatggtcgcttaagtagaatactatgggaatgaagccatctcct
atttatgaactaaatttaactagtattcctacagtaggtgaacaggatcaaaatgaaagg
atgttcgcttatgctgatgtggattgcaaaatcaaatggttttcatgggataaaattcga
ggctctttaaatagcactgtatctagaaatattttcgaaatagaagattctaaattgggg
aatcgatcataaattagtgcattagctatttcccataattcaaagtaaatgggatattgc
tcagttgatggaagaggagcggtggtagaattgactgatagattagaagccttaaataga
attgtatataagtgtcacaaaagagaagaagatttaaaaacgtcatttaaaacagaaaaa
attaatacatattacgctgttaattcatttcaatttaacagtcgatcttatgattgggtt
agcacaagttcttcggacagtacaataattttttgggatttaaaaaagaaaaacaaaatt
accaccatcccatttgatgctcccgttattgctagtcaagtgtctccagatggttatttt
ttggcctatgccactgggtatgactggggataaggtctggatggaattgataataggttt
gcaaataatgttggcgcaatatttatagaaaaacattaactgctatatgtttga

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