KEGG   Paramecium tetraurelia: GSPATT00003008001
Entry
GSPATT00003008001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K13176  THO complex subunit 7
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03013  Nucleocytoplasmic transport
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00003008001
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSPATT00003008001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00003008001
   03041 Spliceosome [BR:ptm03041]
    GSPATT00003008001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     GSPATT00003008001
Spliceosome [BR:ptm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    GSPATT00003008001
SSDB
Motif
Pfam: THOC7
Other DBs
NCBI-GeneID: 5041222
NCBI-ProteinID: XP_001455437
Genoscope: GSPATT00003008001
UniProt: A0DYC3
LinkDB
Position
undetermined
AA seq 172 aa
MLNQKSSLKNILKLQHHKKHQVKKNCKLIDQIKRQQLATEFQKEIAVYEFQIAKASRQLE
AQNFDREQNQELNKSIIEGIKQTDLEIENLKSVYQIEEQIKINRQHYENLSKQISSYENV
SNVVKNIEVATKNIEQLKIQHKQAAELIKIKEKQLFMMLHLMQDLIEVKYEQ
NT seq 519 nt   +upstreamnt  +downstreamnt
atgcttaattaaaagtcatccttaaaaaatatattgaaattacagcaccataagaaacat
taagtgaagaaaaattgtaaattaatcgactaaataaaaagacaataattagctactgaa
ttttaaaaagaaatagctgtttatgaattttaaatagcaaaggcatctagatagctggaa
gcataaaattttgatagggaacaaaattaagaattaaataagtcaataattgaaggcata
aagtaaaccgatttagaaatagaaaatttgaaaagtgtttattagattgaagaataaata
aaaattaatagatagcattatgaaaatttatcaaaacaaataagcagttatgagaatgtt
agcaatgttgttaaaaatattgaagtggctacaaagaatatagagcaattaaaaattcag
cataagtaagcagcagaattaatcaaaattaaagaaaaataattatttatgatgttgcat
ctaatgtaagatttaattgaggtcaagtatgaataatga

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