Paramecium tetraurelia: GSPATT00003111001
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Entry
GSPATT00003111001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GSPATT00003111001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00003111001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GSPATT00003111001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MCCD1
AAA_27
Motif
Other DBs
NCBI-GeneID:
5041325
NCBI-ProteinID:
XP_001455540
Genoscope:
GSPATT00003111001
UniProt:
A0DYM6
LinkDB
All DBs
Position
undetermined
AA seq
1106 aa
AA seq
DB search
MKQTTLQRFLTSSQKKNQPTGLNNTKVSNDNSLIEEKKIEIQYIKPAASFQKEEGVKVIK
EQVVENVQEKPQQLSRLKRNSIVDSEDEQEKKEVDQNELKIDKFTFVGSQEKNKEKKSLA
VFIKQDNTKNNTKTSQKQKKSECDKSGKPLKQSAKLEDEEIDYSQENKQGNLDFRHPTDK
INVYEEFDDVTPKWASIGLSRDKSGKLHGTSDADPTTLLIPQSDFNKLTKCMQQYWKYKS
ENFDKIIFFKLGKFYELFYEDAYIGNKYLDLNWMGRKMHTGFPEKAVHKYKALLLEYGYK
VVIVDQTETPEQMNQRVTQNKKTGQGNTDKIVQRQISEILTKGTYLYEEGESQMNLDEKV
LLVIRKKIISNAIEEYGIAILERQTNTISLAFIENRDKNYESLKTLLLHMRPVETVIDQH
NLPSHDPITKMIGGSVIQSVISHLTASQDNWDEKKALFRLEQYYQNEFPPAIKFYKNNQV
VLQALNGLFTYLNYILILDKVLGCARFKIYNEVFSLQQCMILDSQAIYHLEILQTTNSVD
KKDYSLFGVLNKTVTPGGHRLLRRWVCAPLYQVDQIRERQAMVCDISNFRKERDLFRQSI
KQFPDFERRCSRIYEYSIKSESKAVFYENLSEQRLKEFKSLTSTLKLAQEEITLFGQLQI
NFKSERLRKMMTFEANGGLLPNVQEQLNEFEQYIIWEKEKDKEIPKPVPGVLDTYDQSIA
GVQLVQQKLDNYLQQIKKILFKNNGNIQFVHTKFRYEIEIPDELVEKSKPEDFEFTSSRQ
GYKRYITKEIKDMVTELEQAEELKKQQLNAFGNFIFKHFQSNQSVWDTLIKILNELDALC
SLSVFGDTSEGKMTMPTFNTEKTKLVIKEGKHPCLSNINFVSNSIDMGEKLCKFQLLTGP
NMGGKSTTLRMVCVLAILAQLGCSVPCEEMELSPIDRIFTRIGAKDYLMEGKSTFYVELE
ETLIPLKYGTKNSLFITDELGRGTSTYDGVAIASAVMHYLIKTIQCRVLFATHFRILVEE
AKLISEVTNVHMACYIQDGKVIFLYRLKEGACEASFGINVAKVVGIENSIITRAEDMANF
FENKVQKNTEQTLQKFNQIMKEYGIV
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaaacaacactttaaaggttcttgacttcttcatagaaaaagaatcaacctaca
ggcttaaataacactaaagtctctaatgataatagtttgatcgaagaaaaaaagattgaa
atctaatatatcaagccagccgcttcattttaaaaggaggagggagttaaagtaattaaa
gagcaagtagttgaaaatgttcaagagaagccacaacaattaagcagattaaaaagaaat
agcattgtagatagtgaagatgaataagaaaaaaaagaagtggatcaaaacgaactcaaa
attgataaattcacttttgtgggttcttaagaaaagaataaggagaaaaagtcattggct
gtctttattaaataggataatacaaaaaataacacaaaaacttcttaaaagcaaaaaaaa
tcagaatgtgataaatctggcaaacctttgaaataatctgcaaaattagaggatgaggaa
attgactattcttaagaaaataaataaggaaatctagatttcagacatcccacagacaag
atcaatgtatatgaagagtttgatgatgtgactccgaaatgggcaagtattggcctatct
agagataaaagtggtaaattacatgggacttcagatgcagatccaacaaccctcttaatt
ccttaaagtgatttcaataaactaaccaaatgtatgcaataatattggaaatataagagt
gaaaactttgataaaatcatctttttcaaattaggaaaattctatgaattattctatgaa
gatgcctacattggaaataaatatttagatttgaattggatgggaagaaagatgcataca
ggattcccagaaaaagcagtccacaaatataaggctcttttattggagtatggatacaag
gttgtaatagtagatcaaacagaaactccagaataaatgaatcaaagagtaacctaaaat
aagaagactggataggggaatactgataaaatagtccaaagataaataagtgagatcttg
acgaaagggacgtatttgtatgaagagggagaatcataaatgaatctagatgaaaaggtt
ttactagtgataagaaagaaaatcatatcgaacgcaatagaagaatatggaatagccatt
ttagaaagataaacaaatacgatatcacttgcatttattgaaaatcgagataagaactat
gagtctctcaagactttattacttcacatgagacctgtggaaacagtcattgattagcat
aatctaccctcgcatgatccaattaccaaaatgatagggggatctgttatttaaagtgtg
atttcacatcttacagcatcttaagataattgggatgaaaagaaggccttatttagactt
gaacagtattattaaaatgaatttccgccagccattaaattctataagaacaattaagtt
gtcctttaagctttaaatggattgtttacttatttgaattatatcctaattttagataaa
gttctgggatgtgcaagattcaaaatatataatgaagtattttcactacaacaatgtatg
attttagatagtcaagcaatttatcatttagagattctgtaaactactaattcagtagac
aaaaaagactattccttgtttggtgtcttaaataaaacagttactcctggtggacatcga
ttattaagaaggtgggtttgtgctcccctttattaagttgatcagattagagagagatag
gcaatggtgtgtgatatcagcaactttagaaaggagagagatttgtttagatagagtatt
aagcaatttccagattttgaaagaagatgcagtagaatttatgaatactccatcaaatct
gaaagtaaagccgtattttatgaaaacctctctgaataacgactaaaagaatttaagagt
ttgacctcaactttgaaacttgcttaggaagagataaccttattcggttaattgtaaatc
aacttcaaaagtgaaaggttaagaaaaatgatgacttttgaagctaatggaggtttattg
cccaatgtttaggaataattaaacgaatttgaataatatatcatttgggaaaaggaaaaa
gataaagaaatccctaaaccagttcctggagtcttagatacttatgatcaatcaattgct
ggagttcaattagtttaatagaaacttgataattatctctagcaaattaaaaaaatatta
tttaagaataatggtaatattcagtttgtgcatacaaaatttagatacgagattgaaatt
ccagatgagttagtggaaaagtcaaaacctgaagattttgaatttacatcttcaagacag
ggatacaagagatatatcactaaagaaattaaggatatggttactgagttagaataagca
gaggaattgaaaaagtagtaattaaatgcttttgggaatttcatattcaagcatttttaa
tctaattaaagtgtttgggatactcttattaaaatattaaatgaattggatgcattatgt
tccttgagtgtctttggagatacttcagaagggaagatgactatgcccacattcaatact
gaaaaaacaaagttagttattaaagaagggaaacatccatgtttgtccaacatcaatttt
gtatctaattcaattgatatgggagaaaagctgtgtaaattttaattattgaccggtcct
aatatgggaggaaaaagcactactctaagaatggtctgtgttctagccattttagcctaa
cttggatgctcagttccatgtgaggaaatggaactctctcctatagataggatatttact
agaataggtgcaaaagactatctaatggaagggaaatcaacattttatgtggaattagaa
gaaacattaataccattaaaatatggaaccaaaaattctttgtttatcaccgatgaatta
ggaagaggaacttccacatatgacggagtagctattgcttctgctgttatgcattatctt
attaagactatttaatgtagagtcttatttgcaactcatttcagaattctggttgaagag
gccaaactaattagtgaagttacaaatgttcatatggcttgttatatttaagatgggaaa
gtcatctttctatatcgattaaaggaaggagcatgcgaagcatcttttgggattaatgtg
gctaaagtggtaggaatcgagaattccataattactcgagctgaagatatggcaaatttc
tttgaaaataaggttcaaaagaacacagaacaaactctgcaaaagtttaattaaattatg
aaggaatatgggattgtgtga
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