Paramecium tetraurelia: GSPATT00004916001
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Entry
GSPATT00004916001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03022
Basal transcription factors
ptm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSPATT00004916001
09124 Replication and repair
03420 Nucleotide excision repair
GSPATT00004916001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptm03021
]
GSPATT00004916001
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00004916001
Enzymes [BR:
ptm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSPATT00004916001
Transcription machinery [BR:
ptm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GSPATT00004916001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GSPATT00004916001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C_3
Helicase_C
SNF2-rel_dom
DEAD
Cas3-like_C_2
PhoH
Methyltransf_16
Motif
Other DBs
NCBI-GeneID:
5011725
NCBI-ProteinID:
XP_001425941
Genoscope:
GSPATT00004916001
UniProt:
A0BJ26
LinkDB
All DBs
Position
undetermined
AA seq
645 aa
AA seq
DB search
MRIDEPQNEQQLKKTKNSNDTQWKKYEIILEKFHRDAAAAEETLIQFAEPSSTTTNIQTF
IITFYSLYTAMTLGWNEERIKSEIDRLAKNERIPKDITDFIEKNTQYFNRAYFYLEKDSY
YIDIEMKLLQELKHRKFGQMHNLTSIENYERQDSLLNDNKTFVKFKIKANEHFSVNRELV
EDFNVPVKQEFDYLKDLENTKQDIQKKLQQFRMKAIYQLYSHQNRALKKIFQNDKAHSGV
IILPCGAGKTLLGINVALKIKRKTLIICDQVNDVYQWQKSFIKFTEMDKNNLAIILRTQQ
EVPMAVLGREHIIVITNKDMISSNRKDIKHVTTLEWPLLIMDEVHGLPAEQINAEISKLK
ANMKIGLTATPYRQDNKIKEIFYKVGPKLHESMIVDLKQMGYVSKIYCIQVYVGMQDLYK
QKYEEYRRVNNQFVTNTLYQMNPKKFEVLQSLINIHRTRKDKILVFCEKVNKLADTGTLE
KFAKLNNCPIISQKVEQTERSAIYKLYQEDKLDVIIFGQIADQGLDLPSANVGIQISFNF
KSVRQEFQRMGRIQRKKENQIGEYDCFFYSIVTKGTREVEIQFERQIAVINQGYPYEIIS
ADELKPPQSEADKKLQLDKIVDEMQRKVLETCTQKGDDDREEDGY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagaatagatgagcctcaaaatgaatagcaactgaaaaaaactaaaaacagtaatgac
acttaatggaagaagtatgaaatcatattagaaaaattccatcgagatgcagctgctgca
gaagaaaccttgatataatttgcggagccgagttccacaaccaccaacattcagactttc
atcattacattttattctctatatactgcaatgactcttggctggaatgaagagcgcatt
aaaagtgaaatcgacagattagctaagaatgagagaattccaaaggacattactgatttc
attgaaaagaatactcaatatttcaacagagcgtatttttatttggaaaaagactcttat
tacattgacatagaaatgaaattattgtaagaattgaaacaccgaaaatttgggtagatg
cacaacttaacaagcattgagaattacgagagataagatagcctattgaatgacaacaaa
acatttgttaaatttaaaatcaaagctaatgaacactttagtgttaatagagaattggtg
gaagatttcaatgtacctgttaaacaagaattcgattatctaaaagacttggaaaataca
aagcaagacatataaaagaagctgtaacaatttagaatgaaggctatctattagttatat
agtcattagaatagagccttgaagaaaatattctaaaatgacaaagctcattctggagtt
attattttaccttgtggtgcaggcaaaactctgcttggaatcaatgtggctttaaaaatc
aagagaaaaacacttattatatgcgattaggttaatgatgtctattaatggtaaaagtct
tttattaagtttacggaaatggataaaaacaatttagctattattttgagaacctaataa
gaagtacctatggcagtcttaggaagggaacacatcatagtgattacaaacaaggacatg
atttcatcaaatagaaaggacatcaaacatgtaactactttggaatggccattattgatt
atggatgaagtccatggtttgcctgcagaatagataaatgctgaaatttcaaaattgaaa
gcaaatatgaaaattggtctaactgcaacaccttacagataggataataaaatcaaggag
attttttataaagtaggtcctaaattacatgaatccatgattgtggatcttaaataaatg
ggatatgtcagtaaaatctattgcatctaagtttatgttggcatgtaggatctgtataaa
caaaaatatgaggagtacagaagagtcaataatcaatttgttactaatactttgtattaa
atgaatcctaaaaaattcgaagtcttataaagtttaatcaatatacacagaactagaaag
gataagatcctggtattctgtgagaaagtcaacaaattagcagatactggcactcttgag
aaatttgctaaacttaataattgtcctattattagtcagaaggttgaataaacagaaaga
tcagctatctataaattatatcaagaggataaattagatgttattattttcggttagatt
gccgatcaaggtttggatttgccatctgcaaatgtgggaattcagattagttttaatttc
aagtctgttcgataagagttttaaagaatgggtagaattcaaagaaaaaaggaaaattaa
attggggagtatgattgtttcttctattcaattgtaactaagggaacaagagaagtagaa
atacaatttgagagataaattgccgtaattaattagggatacccttatgaaattatttca
gcagacgaactcaaacctcctcaatcagaagcagataaaaaattataattggataagatt
gtagatgaaatgcaaaggaaggttctagagacttgcacatagaaaggagatgatgatagg
gaagaagatggttattga
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