KEGG   Paramecium tetraurelia: GSPATT00005012001
Entry
GSPATT00005012001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K17302  coatomer subunit beta'
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptm04131]
    GSPATT00005012001
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptm04147]
    GSPATT00005012001
Membrane trafficking [BR:ptm04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    GSPATT00005012001
Exosome [BR:ptm04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   GSPATT00005012001
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_IFT122_2nd WDR90_beta-prop_4th Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 5011821
NCBI-ProteinID: XP_001426037
Genoscope: GSPATT00005012001
UniProt: A0BJC2
LinkDB
Position
undetermined
AA seq 848 aa
MSLKFEIKKKHVARSERVKSVELHPEYAWVLSGLYSGVITIQDYATQTIVKQIEVNQKQQ
PVRCAKFITKKQWVVAVSDDLQLRVFNYNTNEKIKAFDAHTDYIRCVIVHPSQPYLITSS
DDTTIKLWDIDNNFTLIRTFEDHVNYVMMVAFNPRDPNTFASASMDNTVKVWTIQNSKPN
FTLTGHEGGVNCVDFHHGDKPYLISGGDDRSIKIWDYQTKQCIHTLEAHQQNISSAKFHP
DLPLIISTAEDGVIRFWHSNTYKLETSLNYNMERVWSLDIGKDNTLAFGFDEGTVVVKIG
QDEPIVSMQQGKVVYGKNFEFFTINLKAINNTSNDGQVVQTNSKELGISDIYPCGVRHSP
NGHLFAIFSDSEYTIYRSQNFKNSGFGSGTDLIWSSNGDYAVREMYSIKIFKNNTLSYEM
KTDYMVEQLFAGPLLGARSSEFIIFYDWDTAKVIRRIDVSPKKVIWNDTNTIAALATNDE
VYFLQYDPEQLPIFLQQEEEPDGFEDAFQPLCDITESINSGYFIQDVFYYTTLNGKIAYS
VNGKVFIVDQDKRYFIIGYIQQQNKLYLIDKNYSIISYEVNSNVVEFQTQILKKQYQKAE
EILQTIPLQYYDKLSKFLDTLNLKEWAYKLVQDQDHKFDLALQLAFVDDAFQIAQQSQDT
LKLRQVGDLALQQGRIKIAAQALEQADDFGGLLLIYSSLGLKNQLLQLGDKAFQQTKMNI
AFSAYFLCANLDKCLEVLIKSNRLPEAAFFAKTYCPSKISPIVKLWKDSLAKTHPIISQK
IADPFDYPAQFNDLKLAIKVEKFYENIRKQAIPADQFKQFQEFLNQDLFTQLQNNPNLDL
SQITYGSV
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgtctttgaagttcgagataaagaagaagcatgttgctcgttcagaaagagttaagagc
gtagagttgcatccagaatatgcatgggtattatcaggattatatagcggagttataaca
attcaagattatgctacataaactattgttaaataaatagaagtcaattaaaaacagtag
cctgtcagatgtgcaaagtttataacaaagaaatagtgggttgtggctgtgagtgatgat
cttcaattgagagtgttcaattataatacaaatgaaaagatcaaagcatttgacgctcat
actgattatattagatgtgtgattgtgcatccatcttagccatatttaataacaagttca
gatgatacgacaataaagttatgggacattgataataattttacattgataagaacattt
gaagatcatgtaaattatgtgatgatggttgcattcaatccaagagatcctaacacattt
gcaagtgcaagtatggataacacagtaaaggtgtggacaatccagaatagcaaacctaat
ttcacattgactggtcatgaaggtggagtcaattgtgttgattttcatcatggagataaa
ccttatctgatatcaggtggagatgatagatccattaagatatgggattaccaaaccaaa
taatgcatacacaccttggaagcacatcaataaaacatatcatcagctaaattccaccca
gatttaccactcattatttcaactgctgaagacggagtcattagattctggcattcaaat
acctataaattagaaacatcactcaattataatatggaaagagtttggagtttggatata
ggaaaagataatacattggcctttggttttgatgaaggaaccgttgttgttaagatcggt
taagatgaacccattgtttctatgcaacaaggaaaggtcgtctatggtaagaactttgaa
ttctttacaatcaatctcaaagccataaataacacatcaaatgacggataagttgtatag
acaaattccaaagaactgggaattagtgatatctatccctgtggtgtcagacatagtcct
aatggtcatttatttgcaattttcagtgactctgaatacacaatatacagatcacagaac
tttaagaattcaggtttcggatctggcacagatttaatatggtcatcaaatggggattat
gcagtcagggaaatgtattccatcaaaatattcaaaaacaacactttaagttatgaaatg
aaaacagattatatggttgaacaattatttgctggacctttgttgggtgctagaagttct
gaatttattatattttatgattgggacacagccaaagttatcagaaggattgatgtctct
cccaaaaaagtaatttggaatgatacaaatactattgctgcattggcaacaaatgatgaa
gtgtatttcttacaatatgatccagaacaattaccaatctttttacaacaagaggaagaa
cctgatggttttgaagatgccttctaaccattatgtgacataactgaatccatcaactct
ggatatttcatttaagatgtcttctattataccactttgaatggcaaaatagcatactct
gttaatggaaaggtattcattgtggaccaagataaaaggtatttcatcattggttacatt
caacaataaaataaactctatctcatagacaaaaactattcaattattagttatgaggtt
aatagcaatgtggttgaatttcaaacttaaattcttaagaaatagtatcaaaaggcagaa
gaaatcctataaaccattccacttcaatattatgacaaattatccaagtttctagacact
cttaatttgaaggaatgggcctataaattagtctaagactaggatcataaatttgatctc
gctttacaacttgcctttgttgatgatgctttccaaatagcatagcaaagctaagacaca
ctcaagttaagataagttggagatcttgctttacaataaggaagaattaaaatagctgct
taagctttagaataagcagatgattttggaggactcttattaatttattcttcattagga
ttgaagaatcaactattgcaattgggagataaggccttccaacaaaccaaaatgaatatt
gcattctctgcttatttcctatgtgccaacctagacaaatgtcttgaagttcttatcaaa
agtaatagattaccagaagctgccttctttgctaaaacatattgtccatctaaaattagt
ccaattgttaaattatggaaagactctttagctaaaacacatccaatcatatcataaaaa
attgctgatccttttgattatcctgcttaatttaatgatcttaaattagccatcaaggtg
gaaaaattctatgaaaacattagaaaataggccattccagctgatcaatttaaataattc
taagaattcttgaatcaagatctatttacataattgcaaaataaccctaatttggatctt
tcataaatcacttatggatctgtttga

DBGET integrated database retrieval system