Paramecium tetraurelia: GSPATT00005114001
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Entry
GSPATT00005114001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03013
Nucleocytoplasmic transport
ptm03015
mRNA surveillance pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00005114001
09122 Translation
03013 Nucleocytoplasmic transport
GSPATT00005114001
03015 mRNA surveillance pathway
GSPATT00005114001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00005114001
03041 Spliceosome [BR:
ptm03041
]
GSPATT00005114001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GSPATT00005114001
Spliceosome [BR:
ptm03041
]
Complex C
Other components
EJC/TREX
GSPATT00005114001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DUF6108
Motif
Other DBs
NCBI-GeneID:
5013547
NCBI-ProteinID:
XP_001427763
Genoscope:
GSPATT00005114001
UniProt:
A0BP98
LinkDB
All DBs
Position
undetermined
AA seq
131 aa
AA seq
DB search
MSKKQVSDNADRYKGEAGNFQSLESDDGPGPMKSVEGWILIAKGIHEEAQEDDVFDAFSK
YGPIKNLHLNLDRRTGFVKGYALIEFSEFAHAQDALNGVNKSDGICGKKIQVDWAFKKPN
KKGALKQVKKQ
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaataagtaagtgacaatgctgatagatacaaaggagaggcaggtaacttc
tagtctttggaaagtgatgatggaccaggacctatgaaatctgttgagggttggattcta
attgcaaagggaattcatgaagaagcttaagaagacgatgtatttgatgcattcagcaaa
tatggtccaattaagaatcttcatttgaatcttgatagaagaactggctttgttaaaggt
tatgcattgattgagtttagtgaatttgcacacgcttaggatgctttgaatggtgttaac
aaatcagatggaatctgcggcaaaaagattcaggttgactgggcattcaaaaaacctaac
aagaaaggagcattgaaacaagtgaagaaataatga
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