KEGG   Paramecium tetraurelia: GSPATT00005114001
Entry
GSPATT00005114001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03013  Nucleocytoplasmic transport
ptm03015  mRNA surveillance pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00005114001
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSPATT00005114001
   03015 mRNA surveillance pathway
    GSPATT00005114001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00005114001
   03041 Spliceosome [BR:ptm03041]
    GSPATT00005114001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GSPATT00005114001
Spliceosome [BR:ptm03041]
 Complex C
  Other components
   EJC/TREX
    GSPATT00005114001
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 DUF6108
Other DBs
NCBI-GeneID: 5013547
NCBI-ProteinID: XP_001427763
Genoscope: GSPATT00005114001
UniProt: A0BP98
LinkDB
Position
undetermined
AA seq 131 aa
MSKKQVSDNADRYKGEAGNFQSLESDDGPGPMKSVEGWILIAKGIHEEAQEDDVFDAFSK
YGPIKNLHLNLDRRTGFVKGYALIEFSEFAHAQDALNGVNKSDGICGKKIQVDWAFKKPN
KKGALKQVKKQ
NT seq 396 nt   +upstreamnt  +downstreamnt
atgtctaaaaaataagtaagtgacaatgctgatagatacaaaggagaggcaggtaacttc
tagtctttggaaagtgatgatggaccaggacctatgaaatctgttgagggttggattcta
attgcaaagggaattcatgaagaagcttaagaagacgatgtatttgatgcattcagcaaa
tatggtccaattaagaatcttcatttgaatcttgatagaagaactggctttgttaaaggt
tatgcattgattgagtttagtgaatttgcacacgcttaggatgctttgaatggtgttaac
aaatcagatggaatctgcggcaaaaagattcaggttgactgggcattcaaaaaacctaac
aagaaaggagcattgaaacaagtgaagaaataatga

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