Paramecium tetraurelia: GSPATT00005233001
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Entry
GSPATT00005233001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03030
DNA replication
ptm03410
Base excision repair
ptm03420
Nucleotide excision repair
ptm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSPATT00005233001
03410 Base excision repair
GSPATT00005233001
03420 Nucleotide excision repair
GSPATT00005233001
03430 Mismatch repair
GSPATT00005233001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptm03032
]
GSPATT00005233001
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00005233001
DNA replication proteins [BR:
ptm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GSPATT00005233001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GSPATT00005233001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_lid_RFC1
Rad17
AAA_14
RuvB_N
nSTAND3
TIP49
AAA_19
AAA_16
AAA_5
AAA_28
AAA_22
NTPase_1
AAA_18
RNA_helicase
BRCT
AAA_33
ABC_tran
Viral_helicase1
TsaE
AAA_17
AAA_11
Motif
Other DBs
NCBI-GeneID:
5013666
NCBI-ProteinID:
XP_001427882
Genoscope:
GSPATT00005233001
UniProt:
A0BPL7
LinkDB
All DBs
Position
undetermined
AA seq
929 aa
AA seq
DB search
MRKRLIKASHLEEEKPRIEQPITLQQDSSSDDSDQEDDRKQKYSRLQFIDENKQQQLDRF
LQKGNQGQNVPQPKKQKVIEFKMVEETKQTTNQKDEEKRCDLSDDQDSDFDLPTNFKHLA
GITRTSTTTTQATQLLKVTSQPSDVEIKSFEQDKRNQFEQEHVQVAQIEIEEDSHKNTAS
LPLEGKSYYILGNLGKYVREDLVKIIKLYGGFNKCRVLQDTILLQGSLQNNGKSISNSQH
LKDAQKYKNLILDEEGFNNYLISYTGNDLQKSYQLACKDNQLNGQEIKEQSDQQQKQQSQ
QSSQVQKSQPQQLSKQPTNQAVQEVKSNLRAKFDSEVVIVEKQVELKPEIVNFSKNKQIQ
EEQKKVQKIEQIMVEDTKQKCQLWTNKYAPSKVSDCLDQTHVPNIVKWLDKWGKPQLEIC
PGSFQSQNFAAKALLLSGPPGIGKTTIIRLIAKQKSYQLIEWNASDVRSKLQIENYVKHL
QDNTVLRFKDANLISEGKTIILMDEVDGMTGSDRGGNKCLIDMIRLTKVPIVCICNDRNK
QSMRSLANYCLDLQFKKPNQVEIFKKLEYICKSENISYDPAELKQQIEVSQCDIRQLLNL
LQMHKVGLKLHIDKNIGKDGSVTTNLYESTRMLLNYKDSQNLPIHKLMDFYFQDPDMTQF
FYHENYLDLSLVKKTPSNSIQNISLAASSLADADVLNTKVRSQMWGLMPNVGFLSTMYPT
QILKGNILSKVNFPQMLGKISSENKIKRQILEVKEAFASQTYLTNTKAIKFQYIEPFSFF
VIQSLASAGLSCIDEIVTLLKTYNLNIQQFEECIVGSLALFPKRDLMTEITSQVRTALNK
AMKQSMDSADRLGKDRRAIAQTNFVKKTKNNEDDLNEEFNQEEENDEDDQKQKKNTKQKN
INVKQQEKPKKKEEKPQTDKNKQKKKGKK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaagattaataaaagcatctcatctcgaagaagaaaaaccacgaatcgaatag
ccaataaccttataataggactcatcatctgatgattctgattaggaagacgatagaaag
caaaaatattcaagattataatttattgatgaaaacaaacaatagtagttggatcgtttt
ttgcagaaggggaattaaggttagaatgttcctcaaccaaaaaaacaaaaagtcattgaa
ttcaaaatggtagaagaaaccaaataaaccaccaattaaaaggatgaggagaaacgatgt
gacctgtctgatgattaagacagtgactttgaccttcctactaactttaaacatcttgct
ggtatcacaagaacatccacaactacaactcaagctactcaacttttaaaagtcacatct
caaccatcagatgtagaaattaaatcgtttgaacaggataaaagaaatcaatttgaataa
gaacatgtttaagtagcctaaattgaaatcgaggaggattctcataaaaacactgcaagt
ctacctttggaaggaaagtcttattatatattgggaaatttagggaaatacgtacgagaa
gatttagtcaagattattaaactctatggaggattcaacaaatgtagagttctttaggat
acaattttgctttagggatcattacagaacaatggcaagagtatttcaaatagctaacat
ttgaaggatgctcaaaagtacaagaacttgattcttgatgaagagggttttaataattat
ttaatatcatatacaggaaatgatttatagaaatcctattaattagcatgtaaagataac
caattaaatggacaagaaataaaggaataatcagatcaataataaaaacaacaaagttaa
caatcttcataagtctaaaagtcacaaccatagcaactatctaagtaacctaccaattag
gctgtttaagaagttaaaagcaatcttagagctaagtttgacagtgaagttgttatagtt
gaaaaataagttgaattgaaaccagaaatagttaatttctccaaaaataaacaaatccaa
gaagaataaaagaaagttcaaaaaatagagtaaataatggttgaagacactaaataaaaa
tgttaactttggactaataaatatgctccttctaaagtatcagactgtctagatcaaaca
catgtcccaaatattgttaaatggttagataaatggggcaagccttaattagaaatctgt
cctggctcattttaatcataaaactttgctgctaaggctctcctattgtcgggtcctcct
ggaattggcaaaacaaccattatcagattgatcgcaaaataaaagtcttattagttgatt
gaatggaatgcatctgatgttagaagtaaactttaaattgaaaattatgtgaaacatctt
taagacaacacagtgcttagatttaaggatgctaatttgattagtgaaggaaagactata
atcctaatggatgaagtagatggaatgactggtagtgatagaggtggaaataaatgctta
attgatatgatcagattaacaaaggtgcctattgtttgtatttgcaacgatagaaacaaa
taatcgatgagatctctagccaattactgtttagatttatagtttaaaaagcccaattaa
gtggaaatttttaaaaaacttgaatacatctgcaaatctgaaaatatcagttacgaccct
gcagaattaaaataataaatagaggtttcttagtgtgatatcagataattgctaaactta
ttgtaaatgcataaagttgggttgaaattgcacatcgacaaaaatatcggaaaggatggt
tcagttactaccaatttatatgaatcgacaagaatgctattgaattataaggactcacaa
aacttacctatccataaattaatggacttctatttttaggatccagatatgactcaattc
ttttatcatgagaactatttagacttgagtttggtgaagaagactccttccaattcaatt
taaaatatttctctagctgcctcatcactggctgatgctgatgttttgaatacaaaggtg
agatcatagatgtggggattgatgccaaatgtgggattcttatcaaccatgtatcctact
taaattttgaaagggaatatactttcaaaagtgaattttccttagatgcttggtaaaata
tcgagtgagaataaaattaaaagacaaattttagaagtgaaagaagcatttgcctcataa
acatatttaacaaatactaaagcaattaaattttaatacatagaaccattttcattcttt
gttatttaaagtttagcaagcgctggcttaagttgcattgatgaaatagtaacgttgtta
aaaacctacaatctaaatatttaataatttgaagaatgtattgttggttcattggcattg
ttcccaaaaagggacttgatgactgaaataacatcacaagtcagaacagctttgaataaa
gcaatgaaataatctatggattctgcagatagattaggtaaagacagaagagcaatagct
taaaccaattttgttaagaagaccaaaaataatgaagatgatttaaatgaagaatttaat
taagaggaggagaatgatgaagacgattaaaaatagaagaagaatactaaataaaaaaat
attaatgttaaatagtaagaaaaaccaaaaaaaaaggaagaaaagccatagactgataaa
aataaataaaaaaagaaaggaaagaaatga
DBGET
integrated database retrieval system
