Paramecium tetraurelia: GSPATT00006060001
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Entry
GSPATT00006060001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSPATT00006060001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptm03021
]
GSPATT00006060001
03036 Chromosome and associated proteins [BR:
ptm03036
]
GSPATT00006060001
Transcription machinery [BR:
ptm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
GSPATT00006060001
Chromosome and associated proteins [BR:
ptm03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
GSPATT00006060001
RSF complex
GSPATT00006060001
WICH complex
GSPATT00006060001
B-WICH complex
GSPATT00006060001
NORC complex
GSPATT00006060001
BRF complex
GSPATT00006060001
NuRF complex (fruit fly)
GSPATT00006060001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_14
MurT_C
Motif
Other DBs
NCBI-GeneID:
5017389
NCBI-ProteinID:
XP_001431605
Genoscope:
GSPATT00006060001
UniProt:
A0C090
LinkDB
All DBs
Position
undetermined
AA seq
654 aa
AA seq
DB search
MSNQSDDENEVLQVELASDEEQRAEEEDERIKKLEQDKKSFMSQIKSTGRMNTNIKFDNI
ESKINTLLENAEKYAMFLLHRHKRTQESKQKVQGQQRGKHRQIVEDGSEEEDFDDTPTVL
EKQPTILKGGQLKSYQLTGLNWMISLFEEGINGILADEMGLGKTIQTIGFLAFLKEYKKI
SGPYLIVAPKSTLGNWMREFKIWMPCMRVVKLIAIKEERDEILNRYFQPGKFDVCLTSYE
GVNICLKHIRRFQYKYIIIDEAHKIKNEDAIISQNLRKIRTNYKLLLTGTPLQNTPHELW
SLLNYLLPDLFDSSEVFDKWFEVNTEAKLKEGNETIHQDELEQRNLEMVQKFQKILRPFM
LRRTKAEVERMLPPKQEIHLFIKMSNLQKSMYQNILIHNNPHEGDDKGFYMNKLMQLRKI
CLHPYLFPEVEDKSLPALGEHLVDVSGKMRVLDKFLQKLSEGQHQILIFSQFTMMLNILE
DYCNFRGYEYCRIDGETEIQSRDDQIAEFTAPDSKKFIFLLSTRAGGLGINLATADTVII
YDSDFNPQMDMQAMDRAHRIGQKSRVMVYRMACEHTVEEKIIERQQIKLRWDSLMVQQGR
LQQKQNGKLLSKEDLKELTTYGASQIFKLDGDDIKDEDIDILLKRGEQLTKENE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattaaagcgatgatgagaacgaggtattgcaagtggaattggcaagtgatgaa
gaataaagagcagaggaagaagatgaaagaataaaaaaattagaacaagacaaaaagagc
ttcatgagttaaataaagtccactgggagaatgaacaccaatattaaatttgataacata
gagtcgaagataaatacactactagaaaatgctgagaaatatgccatgtttctattgcac
cgacacaagagaacctaggagagtaagcagaaggttcaaggtcagtagagaggaaaacat
agacagatagttgaagatgggagtgaagaagaagatttcgatgatactcccacagtattg
gaaaagcagcctactattttaaagggaggataattgaagtcctatcagttgactggattg
aattggatgatttctttgtttgaagaaggaattaatggaatattggctgatgaaatgggg
ttgggcaaaacaatacagacaattggattcttggcttttttgaaagagtacaaaaagatt
agcggaccttatttgatagtggctccaaagtctactttgggtaattggatgagagagttc
aaaatatggatgccttgcatgagagtagtaaaattgatagcaataaaagaagagagggac
gaaatattaaacagatatttttaaccaggaaaatttgatgtttgtttaacaagttatgag
ggagtcaacatttgtttaaagcatataagaagatttcaatacaaatacatcataatagat
gaggcacacaagataaagaatgaagatgcaatcatcagtcaaaacttacgtaaaattaga
actaattataaattattacttactggaacacccctatagaacactccacatgaattatgg
agtttattgaattacttactgcctgatctatttgattcatcagaagtgtttgacaaatgg
tttgaagtaaacacagaagcaaagttgaaagaaggaaatgaaaccatacatcaagatgaa
ttggaataaaggaatttggaaatggtctagaagttctagaagatattgagaccattcatg
ttaaggagaaccaaagctgaagtggaaaggatgcttcctccgaagtaggaaatccatttg
tttattaaaatgtctaatctgcaaaaatcaatgtatcagaatatcttgattcacaataac
ccacatgaaggagatgacaaaggcttttacatgaataaactaatgcaattgcgtaaaatc
tgtttacatccttatctattccctgaagttgaagacaagagtttaccagccttgggagaa
cacttagtcgatgtgagtggtaagatgagagtcttagataagtttctacagaaattaagt
gagggctaacatcagatactcatcttctcataatttactatgatgttgaatattctagaa
gattattgtaattttagaggttacgagtattgcagaattgacggagaaactgaaatacaa
tcaagagatgattagattgcagagtttacagctccagacagcaagaaattcatattttta
ttgtcaaccagagctggtggtcttggtatcaatttagctactgcagatactgttattatt
tatgactctgatttcaatccctagatggatatgtaggccatggatagagctcatagaatt
ggataaaagagcagagtcatggtctatagaatggcttgtgaacatactgttgaagaaaag
atcatcgaaagataatagattaaattacgttgggattcacttatggtttagtaagggaga
cttcagtagaagcagaatggcaaattattatccaaagaagacttaaaggaattaaccact
tatggagcttcacagattttcaaattggatggagatgatatcaaggatgaagatattgat
atcttacttaaaagaggtgagcaattgactaaagaaaatgaatga
DBGET
integrated database retrieval system
