Paramecium tetraurelia: GSPATT00006614001
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Entry
GSPATT00006614001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00006614001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00006614001
Spliceosome [BR:
ptm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GSPATT00006614001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
SrpI-like
Motif
Other DBs
NCBI-GeneID:
5020490
NCBI-ProteinID:
XP_001434705
Genoscope:
GSPATT00006614001
UniProt:
A0C941
LinkDB
All DBs
Position
undetermined
AA seq
463 aa
AA seq
DB search
MIDKDFMQDLEEEEEQQIAEAKQQVEDEPTCSLLKDNKFLQHYQRVLEVSAYQIQDETIN
ASHEEYHLILRSNEYSTIIDQEILNIHKQLKDVYHKKFPELEKIIINPIEYVKIVRLIRN
AIDLQAIDFSQLLSGQQVVAVNIAAKQSLIGQLSEEDISLVDQLCHKIETLDSYNQKIIC
YIESRMKYIAPNVSALIGTQLASKLMAAAGGIEKLANMPAGNIQVMGSVKKNMLGMSRAM
HNRNTGYFGTLEIVQKASGKLQNQIVRMLATNVAKAARVDNMKTCPKGNVGEDLRIKMMK
RYQKIQEPPPAKLEKPLPIPDENKKRRRGGKRFRKQKERLAMTEVRKYANRLKFGLEAED
EIKDTGIGLGMLSQGIGKVKLHIKKDKPIGLSKKLQQRLAQTKTQSGGGTGGLTSSIAFT
PTQGIELVNPEAGYLSKVPDQYFNRESGFRTVLKKEREFGRQH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgattgacaaagattttatgcaagatttggaggaagaggaagagcaacaaattgcagag
gcaaaataataggttgaggatgaaccaacttgttctttacttaaagataacaaatttctt
tagcattatcaaagagttttagaagtatctgcttatcaaatctaagatgaaactataaat
gcaagtcacgaagaatatcatctaattttaaggtcaaatgaatatagtacaatcattgat
taagagattttgaatatccataaataattgaaggatgtataccataagaagtttccagaa
ttggaaaaaataatcataaaccctatcgagtatgttaagatagtcaggttaattcgaaat
gctatagatcttcaagccatagatttttcataacttttgagtggttagcaagtagttgct
gtcaatatagctgctaaacaatccttaattggttaactttcagaggaagacatctccttg
gttgattagttgtgtcataagatcgagacattagatagctacaattagaaaatcatctgc
tatattgaatctagaatgaagtacatagctccaaatgtctcagccttaataggtacacaa
ttggcatctaagttgatggcagctgcaggaggaattgaaaagcttgccaatatgccagca
ggtaacatttaagtgatgggaagtgttaagaaaaatatgttgggaatgagtagagctatg
cataatagaaacactggttattttggaacattggagattgtacagaaagcgtcagggaaa
ttgtaaaatcaaatagtaaggatgttagcaaccaatgtggccaaagcagccagagttgat
aatatgaagacatgtcccaaaggaaatgtaggagaggatctaagaataaaaatgatgaag
agatattagaagatttaagaacctcctcctgctaaattagaaaaaccattacctattcca
gatgagaacaagaagagaagaagaggagggaagaggttcagaaaatagaaagaaagattg
gctatgacagaagtgaggaagtatgctaatagattgaaatttggattggaggctgaggat
gaaatcaaggacacaggaattgggttgggaatgttaagtcaaggtattggcaaagtaaag
ttacacatcaagaaggataagccaattggtctcagtaagaaattataatagagacttgca
caaacgaagactcaatctggaggtggtactggtggattaacttcaagcattgcctttaca
cccacttaaggaattgaattagtaaacccagaagctggatatttatcaaaggttcctgat
taatattttaatagagaatctgggtttagaactgtattaaaaaaggaaagagaatttgga
agataacattga
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