Paramecium tetraurelia: GSPATT00007209001
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Entry
GSPATT00007209001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00007209001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00007209001
Spliceosome [BR:
ptm03041
]
Common components
Common spliceosomal components
SR proteins
GSPATT00007209001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_3
zf-CCHC_3
RBD_DEAH11
zf-CCHC_2
DbpA
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
5022179
NCBI-ProteinID:
XP_001436394
Genoscope:
GSPATT00007209001
UniProt:
A0CDY0
LinkDB
All DBs
Position
undetermined
AA seq
204 aa
AA seq
DB search
MGEIVPNQLFVAGYSRNKIPDEKGIKDIFKKYGSIKDVAYKGSYSFVTFSAESEAQNAIS
ALNGQQINGQKLKVDIVDNHKGRRSGPQEKDECFKCGQGGHWARECPNRTSPNRRRKYSN
SRSRHQRSRRSNSRSRSYSSYSSSHSRRRRDAKKRSRYSRRSRSPKRDNKRKKSTSCRRS
QSNSRSRSSVSNKQRQSNKSSSSK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagatagtgccaaatcaattgtttgttgctggatacagtcgtaacaaaatacca
gatgaaaagggaatcaaagatattttcaagaaatatggaagcatcaaggatgttgcctat
aaaggctcctactcatttgttactttctccgcagaatcagaagcccagaatgccatttca
gctttgaatggccaataaatcaatggataaaagcttaaagttgatattgtggacaatcac
aaaggtagacgcagtggtccttaagaaaaagacgagtgcttcaagtgtggatagggtggt
cattgggctagagaatgtcccaatcgaacatcgccaaatagaagaagaaagtattcgaat
tcaagatcaagacatcaaagatcaagaagatctaattcgagatctcgctcatactcttct
tattcatcttctcattccagaaggagaagagacgcaaagaagagaagcaggtacagcaga
agaagtagaagtccaaaaagagacaacaagagaaagaaaagtaccagctgcagaagatca
caaagcaattcaaggtccagatcttcagtcagcaataaataacgctagtcaaataagtca
tcttcatctaaatga
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