Paramecium tetraurelia: GSPATT00008233001
Help
Entry
GSPATT00008233001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03013
Nucleocytoplasmic transport
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00008233001
09122 Translation
03013 Nucleocytoplasmic transport
GSPATT00008233001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00008233001
03041 Spliceosome [BR:
ptm03041
]
GSPATT00008233001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
GSPATT00008233001
Spliceosome [BR:
ptm03041
]
Complex C
Other components
EJC/TREX
GSPATT00008233001
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
GSPATT00008233001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
5024866
NCBI-ProteinID:
XP_001439081
Genoscope:
GSPATT00008233001
UniProt:
A0CLL7
LinkDB
All DBs
Position
undetermined
AA seq
554 aa
AA seq
DB search
MSEFKLMEIESYILNFKVRHTEILKQKLQKLHEEESADQLQPFYQAFLKNCRDYLHQKLK
LTTKKVLDEDLLELLKVNIFLAELSYTICKDVPDLKSYPLTFSEDIYECLSLSELQDYFN
NLYSQIATISKFQDENKYVLLRICNSMLKRLSTTHDTFLRGQVQIFLTQIFSTIHPSLRK
KPINIRDRGFDEEAVKVNASLPYSFYKNFWTLQKYLNNSELIFRNKVEFDDIGEEAGQVS
QNVSEPQRTKNLQAVIKVIMRALQYFKENPIEPEIITVKRFPKFLTKYSLFKNQLNDPYF
RKLFLNQVLLFIFVAELENQEKQFIQNLKIEVQKQLDELGDKLGEKVQHLIDTERTWRLW
VTEKQCFDDGYEKLSIKASEKAKKKRQEIQKRIYDDLKYKQTDAFQYILQDQGRPYKIET
NPIEPGLNYYLNEVFYQLDQNRKIADNERCKNMKDYAWKSVRVISKFMLKELKITNLITQ
DLKPLPNLEDIAENLKNAGNEMTSERLQQSNNNNNNNNNNNNTNNNNNNNNNNNNNNSVT
IKPVHINQQIPNQK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatttaaactaatggaaattgaatcgtacattttaaatttcaaagtgagacac
acagaaatattaaaatagaaattgcaaaagctccatgaggaagaatccgcagattaattg
tagccattttactaagctttcctaaaaaactgtagagactatttacatcaaaaattaaaa
ttgactactaaaaaagttctagatgaggatctcttagaacttcttaaagtaaatattttt
ttggctgaattatcttatacaatttgcaaagatgtgccagatctcaaatcatacccactt
acttttagtgaagatatttatgaatgcttgtctctttcagaacttcaggattactttaat
aatttatatagttagatagccacaatatcaaaattctaagacgaaaacaaatatgttttg
ctgagaatttgtaattccatgctcaaaagactatcaacaacacatgacacatttttaaga
ggataagtttaaatattcttgacccaaatattctcaacaatacatccatccttgaggaag
aagccaatcaatataagggatagaggctttgacgaggaagcagtaaaagtcaatgcttca
ttgccatattctttctataaaaatttttggactttacaaaaataccttaataactctgaa
ttaatttttagaaacaaagtagaattcgatgatattggagaagaagctggttaagtgtct
tagaatgtgtctgaaccctaaaggacaaagaatctataagctgtcataaaagtaataatg
agagcattgcaatatttcaaagagaatcctatcgaacctgagattataactgtgaaaagg
tttcctaagttcctaacaaaatactctttattcaaaaattaacttaatgatccttacttt
agaaagttattcttaaattaagttttattgtttatttttgtagcagaacttgaaaatcaa
gaaaaataattcatataaaatttgaaaattgaagttcaaaaataattagatgaattagga
gataaattaggagaaaaagtttaacatttaattgatacagaacgaacttggcgactttgg
gtgacagaaaaacaatgttttgatgatggctatgaaaaacttagcattaaagcatctgag
aaagccaaaaaaaaaagataagaaattcagaaaagaatttacgacgatctcaaatataaa
tagactgatgcatttcaatacattctccaagatcaaggaagaccttataaaattgaaact
aatcctattgaacctggattaaattattatttaaatgaagtgttttattaattagatcaa
aatcgtaaaatagctgacaacgaaagatgtaagaatatgaaagattacgcatggaaatca
gtgagggtcatctccaaatttatgttaaaagaacttaaaataacaaacctaataacatag
gatttgaagccattacctaatttagaagacatagcagaaaatttgaagaatgctggaaac
gagatgacatctgaaagattataataatctaataataacaacaataataacaataataat
aataatacaaataataataacaataataataataacaataacaataataattctgttaca
attaaacctgttcacatcaattaataaatacctaactagaagtga
DBGET
integrated database retrieval system