KEGG   Paramecium tetraurelia: GSPATT00008233001
Entry
GSPATT00008233001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12878  THO complex subunit 1
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03013  Nucleocytoplasmic transport
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00008233001
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSPATT00008233001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00008233001
   03041 Spliceosome [BR:ptm03041]
    GSPATT00008233001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     GSPATT00008233001
Spliceosome [BR:ptm03041]
 Complex C
  Other components
   EJC/TREX
    GSPATT00008233001
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    GSPATT00008233001
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 5024866
NCBI-ProteinID: XP_001439081
Genoscope: GSPATT00008233001
UniProt: A0CLL7
LinkDB
Position
undetermined
AA seq 554 aa
MSEFKLMEIESYILNFKVRHTEILKQKLQKLHEEESADQLQPFYQAFLKNCRDYLHQKLK
LTTKKVLDEDLLELLKVNIFLAELSYTICKDVPDLKSYPLTFSEDIYECLSLSELQDYFN
NLYSQIATISKFQDENKYVLLRICNSMLKRLSTTHDTFLRGQVQIFLTQIFSTIHPSLRK
KPINIRDRGFDEEAVKVNASLPYSFYKNFWTLQKYLNNSELIFRNKVEFDDIGEEAGQVS
QNVSEPQRTKNLQAVIKVIMRALQYFKENPIEPEIITVKRFPKFLTKYSLFKNQLNDPYF
RKLFLNQVLLFIFVAELENQEKQFIQNLKIEVQKQLDELGDKLGEKVQHLIDTERTWRLW
VTEKQCFDDGYEKLSIKASEKAKKKRQEIQKRIYDDLKYKQTDAFQYILQDQGRPYKIET
NPIEPGLNYYLNEVFYQLDQNRKIADNERCKNMKDYAWKSVRVISKFMLKELKITNLITQ
DLKPLPNLEDIAENLKNAGNEMTSERLQQSNNNNNNNNNNNNTNNNNNNNNNNNNNNSVT
IKPVHINQQIPNQK
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgagtgaatttaaactaatggaaattgaatcgtacattttaaatttcaaagtgagacac
acagaaatattaaaatagaaattgcaaaagctccatgaggaagaatccgcagattaattg
tagccattttactaagctttcctaaaaaactgtagagactatttacatcaaaaattaaaa
ttgactactaaaaaagttctagatgaggatctcttagaacttcttaaagtaaatattttt
ttggctgaattatcttatacaatttgcaaagatgtgccagatctcaaatcatacccactt
acttttagtgaagatatttatgaatgcttgtctctttcagaacttcaggattactttaat
aatttatatagttagatagccacaatatcaaaattctaagacgaaaacaaatatgttttg
ctgagaatttgtaattccatgctcaaaagactatcaacaacacatgacacatttttaaga
ggataagtttaaatattcttgacccaaatattctcaacaatacatccatccttgaggaag
aagccaatcaatataagggatagaggctttgacgaggaagcagtaaaagtcaatgcttca
ttgccatattctttctataaaaatttttggactttacaaaaataccttaataactctgaa
ttaatttttagaaacaaagtagaattcgatgatattggagaagaagctggttaagtgtct
tagaatgtgtctgaaccctaaaggacaaagaatctataagctgtcataaaagtaataatg
agagcattgcaatatttcaaagagaatcctatcgaacctgagattataactgtgaaaagg
tttcctaagttcctaacaaaatactctttattcaaaaattaacttaatgatccttacttt
agaaagttattcttaaattaagttttattgtttatttttgtagcagaacttgaaaatcaa
gaaaaataattcatataaaatttgaaaattgaagttcaaaaataattagatgaattagga
gataaattaggagaaaaagtttaacatttaattgatacagaacgaacttggcgactttgg
gtgacagaaaaacaatgttttgatgatggctatgaaaaacttagcattaaagcatctgag
aaagccaaaaaaaaaagataagaaattcagaaaagaatttacgacgatctcaaatataaa
tagactgatgcatttcaatacattctccaagatcaaggaagaccttataaaattgaaact
aatcctattgaacctggattaaattattatttaaatgaagtgttttattaattagatcaa
aatcgtaaaatagctgacaacgaaagatgtaagaatatgaaagattacgcatggaaatca
gtgagggtcatctccaaatttatgttaaaagaacttaaaataacaaacctaataacatag
gatttgaagccattacctaatttagaagacatagcagaaaatttgaagaatgctggaaac
gagatgacatctgaaagattataataatctaataataacaacaataataacaataataat
aataatacaaataataataacaataataataataacaataacaataataattctgttaca
attaaacctgttcacatcaattaataaatacctaactagaagtga

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