Paramecium tetraurelia: GSPATT00008558001
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Entry
GSPATT00008558001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00008558001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00008558001
Spliceosome [BR:
ptm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
GSPATT00008558001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
5025261
NCBI-ProteinID:
XP_001439476
Genoscope:
GSPATT00008558001
UniProt:
A0CMR2
LinkDB
All DBs
Position
undetermined
AA seq
447 aa
AA seq
DB search
MIDEIKKKVKYNQQCPYIATICRHMLDFDFEKLCSVTLSNLNVYVCLICGKYYQGKSINT
QAYIHSLEQDHHLFMNLQNTKIYCLPDNYEVVDHSLEDIQYNLDPKFNNLKELDDNVEES
RALDGTTFLPGFVGLNNLSKSDYFNVVMQALCRIKPLRNFMIFLQFQKSATEPFDYNCLL
SQRFSELTRKIWNPRNYKGHVSPHELLQAVTLKSNKQFKIGQQSDPMHLIIWFLDNLKKE
LLHINKINTIISDCFQGELQYEWYKPLKNAIGYQPIPIIEQKSFFYLSLDLPSTPLQKDG
SQKALIPSISIQELIKKYDGFTNTDSADGRRRYTITKFPKYLIIHMKRFIKNNFFMEKNP
TIVTFPLNDLDLSQCLNLEQQNVKYNLIANICHEGTAKVGIYKIHVKNEANNQWFQIQDL
HKQNIVPQLISVSEAYVQIYELQQQQQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgatagacgaaatcaagaaaaaggttaaatacaaccaataatgtccatacatcgccacc
atatgtcgacacatgctcgattttgatttcgaaaaattatgctccgttactctttcaaat
ctgaatgtgtatgtgtgtctcatctgcggcaaatattactaagggaaatccatcaatacc
caagcctacattcattcactcgaataagaccatcacttatttatgaatcttcaaaatact
aaaatatactgtttaccagataactatgaagtggtcgatcattcacttgaagatatccaa
tataatctagatcctaaatttaataatcttaaggaattggatgataatgtcgaagaatcc
agagccttggatggaactacattcctgccagggtttgtcggattgaacaatctaagcaaa
tcagactatttcaatgttgtcatgcaagccttgtgtcgtatcaaaccattgagaaatttc
atgatcttcttgcaattccaaaagagtgccacagaacctttcgattacaattgtcttcta
tcccaaagattctcagaattaacgagaaaaatttggaatcctcggaattacaaaggacac
gtgagtcctcatgaattgctccaagctgtcactcttaaaagcaataaacaattcaaaatc
ggataacaatcagatcctatgcatttgatcatctggtttctagacaaccttaaaaaagaa
ttattgcacatcaacaaaatcaatactatcatatctgattgtttccaaggagaattgcaa
tacgaatggtacaaaccacttaaaaatgccattggatatcaaccaattccaattatcgaa
taaaaatcattcttctatctgtctttagatctaccttcaactccactctaaaaggacggc
agttaaaaggctctaattcccagtatatcgattcaagaattaattaaaaagtacgacgga
ttcactaatacagacagtgctgatggcagaagaagatacacaattaccaagtttcccaaa
tatttgattatacatatgaagagattcatcaaaaataatttctttatggaaaagaaccca
actattgttaccttcccattaaatgatttggatttgagttaatgcttaaacttggaataa
taaaatgtcaagtataatttaatagccaatatttgtcatgagggaacagccaaagttgga
atctacaaaattcatgttaaaaacgaggccaacaatcaatggttctaaattcaagatttg
cataaacaaaatattgttccttaacttatcagtgtaagtgaggcttatgtataaatttat
gaattataataataacaataatga
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