KEGG   Paramecium tetraurelia: GSPATT00008773001
Entry
GSPATT00008773001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03008  Ribosome biogenesis in eukaryotes
ptm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GSPATT00008773001
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSPATT00008773001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptm03021]
    GSPATT00008773001
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00008773001
   03009 Ribosome biogenesis [BR:ptm03009]
    GSPATT00008773001
   03016 Transfer RNA biogenesis [BR:ptm03016]
    GSPATT00008773001
Transcription machinery [BR:ptm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     GSPATT00008773001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     GSPATT00008773001
Ribosome biogenesis [BR:ptm03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    GSPATT00008773001
Transfer RNA biogenesis [BR:ptm03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    GSPATT00008773001
SSDB
Motif
Pfam: XRN_N
Other DBs
NCBI-GeneID: 5025513
NCBI-ProteinID: XP_001439728
Genoscope: GSPATT00008773001
UniProt: A0CNG4
LinkDB
Position
undetermined
AA seq 214 aa
MGVPAFFRWLCARNPKALLEVLENSDESCLSNNPDIDNLYLDMNGIIHPCSHPDQGGIPI
PVTYDDMFVNVFHYIDRLVDIMVLPQEPNQISKEVVDLEQPKNPFEFRKKRNVYEITGEL
KAQIRTLQNTYIEKNFDSNQITPGTEFMQKLNIALQYYIYDRMNNNPLFRNVLIIFNDSS
IPGEGERQNPLICQRSKKTNELQNSQTLFVWSRC
NT seq 645 nt   +upstreamnt  +downstreamnt
atgggggtacccgcattcttcagatggctttgtgccagaaatccaaaggctctattggaa
gtcttggaaaactcagatgaatcctgcttgtcaaacaacccagatattgataatctctac
cttgatatgaatggaatcatccatccctgctctcatcctgactaaggaggcattccaatt
ccagtcacatatgatgacatgtttgtgaatgtatttcactacatagatcgtttagttgat
attatggtgttgccccaagagccaaattaaattagcaaagaagtcgtagatttagagcag
cctaagaatccattcgaattcagaaagaaaaggaacgtttacgagattactggcgaactt
aaggcttaaattcggacgctttaaaatacatatattgagaaaaactttgatagtaactaa
attactccaggaactgaatttatgcaaaagttgaatattgccttgcagtattacatttat
gatagaatgaacaataatcctctatttagaaatgttctcataattttcaatgattcaagt
atcccaggagagggagaacgacaaaatcctttaatttgttagagatcaaagaaaacaaat
gaattataaaacagttagacattgtttgtatggagcagatgctga

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