Paramecium tetraurelia: GSPATT00009030001
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Entry
GSPATT00009030001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K10740
replication factor A3
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03030
DNA replication
ptm03420
Nucleotide excision repair
ptm03430
Mismatch repair
ptm03440
Homologous recombination
ptm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSPATT00009030001
03420 Nucleotide excision repair
GSPATT00009030001
03430 Mismatch repair
GSPATT00009030001
03440 Homologous recombination
GSPATT00009030001
03460 Fanconi anemia pathway
GSPATT00009030001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptm03032
]
GSPATT00009030001
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00009030001
DNA replication proteins [BR:
ptm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
GSPATT00009030001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
GSPATT00009030001
MMR (mismatch excision repair)
GSPATT00009030001
DSBR (double strand breaks repair)
HR (homologous recombination)
GSPATT00009030001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_3
Sigma54_CBD
DUF5678
Motif
Other DBs
NCBI-GeneID:
5025821
NCBI-ProteinID:
XP_001440036
Genoscope:
GSPATT00009030001
UniProt:
A0CPC2
LinkDB
All DBs
Position
undetermined
AA seq
110 aa
AA seq
DB search
MTENPTSFQRINADMISKFKGQYVTLVGKLIQSKGDYVEFSVDGTIVKVTEIEEVPESTE
DILLEIRGKLNEDGYLEAKEFTELDQTFDFELYKKVINMVQGQFRELFYD
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatccaactagtttttagagaataaatgcagacatgatatcaaaattcaaa
gggtaatatgtgacacttgttggaaaattaatttaaagcaaaggtgattacgttgaattt
agtgtagatggaacaattgtaaaagtaacagagattgaagaagttccagaaagtactgaa
gatatccttttggaaataagaggcaaattaaatgaggatggttatttagaagcaaaagaa
tttacagaattagatcaaacatttgatttcgaactatataagaaagtgataaatatggtt
taaggataatttagagagttattttatgactga
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