Paramecium tetraurelia: GSPATT00009182001
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Entry
GSPATT00009182001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03030
DNA replication
ptm03410
Base excision repair
ptm03420
Nucleotide excision repair
ptm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSPATT00009182001
03410 Base excision repair
GSPATT00009182001
03420 Nucleotide excision repair
GSPATT00009182001
03430 Mismatch repair
GSPATT00009182001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptm03032
]
GSPATT00009182001
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00009182001
DNA replication proteins [BR:
ptm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GSPATT00009182001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GSPATT00009182001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
RuvB_N
AAA_14
AAA_5
AAA_22
AAA_16
AAA_19
RNA_helicase
BRCT
AAA_28
AAA_18
ALOG_dom
NTPase_1
AAA_33
ABC_tran
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-GeneID:
5025972
NCBI-ProteinID:
XP_001440187
Genoscope:
GSPATT00009182001
UniProt:
A0CPS3
LinkDB
All DBs
Position
undetermined
AA seq
933 aa
AA seq
DB search
MGKKKLIKTADVIEEKPQIQQPKNSLQVSSSEDSDQQEDCKQNFSRYQIIDDNKHQQGQL
DRYFQKGKQAQTAPQPKKPKVIEFRMVEETKLPNKGKEEEKRDDQSDESDSDFDLPTKFQ
HLAKITRTSTINTQATQVTKVQPEEKIAETKTCQQEILNQFEQEQIQMTRFEIEEDSQLN
IPNKPLQRYKYFLIGNFQKYQKEHIIQIIRYYGGYLNCKILKDTIIIQGDSLNNANDMKD
NSLLANAKIQKSTILDFEAFNSHLKQYTGNDLQKSFQLACQCTIQNVGQQGMQEKQDLQS
KQKIVQNQSSFIQSKSQQQSKLPISQPIQEINTNLRAKFDSDVVLIEKQVELKPEIVNFS
KDKQIQKDQKKISKIEQITVEETKQKLQLWTNKYAPSKVSDCLDQTHVSNIVKWLDKWGK
TQLEICPGSFQSQNFAAKALLLSGPPGIGKTTIIRLIAKQKSYQLIEWNASDVRSKLQIE
NYVKHLQDNTVLRFKDANLISEGKTIILMDEVDGMTGSDRGGNKCLIDMIKLTKVPIVCI
CNERNKQSMRTLANYCLDLQFKKPNQVEIQKKLEFICKSENINYDPAELKQQIEFSQCDI
RQLLNLLQMHKVGLKLHIDKNIGKDGSVTTNIYESTKILLNYKDSQTLPIHKLMDYYFQD
PDMTQFFYHENYLDLIKKAPSNTISHISQAASSLADADVLNSKVRSQMWGLMPNVGFLST
MYPTQILKGNLLSKVNFPQMLGRISSENKIKRQILEVKEAFAQQTYLTNTKAIKFQYIEP
YAFIIIQSLASAGLSCIDEVVSLLRNYNLNIQQFEECIVGSLALFPKRDLMTEIASQVKA
SLNKAMKQSMDSADRFGKERRLIQSTNIVKKTQNIEDDLNEELNQEEEIEEDEQNQKKNT
KQKNKNIKQQEKHKNKQEKQGTDKNKQRKKGKK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaaaaaattaataaaaacagccgatgttattgaagaaaaacctcaaatctaa
cagccaaaaaattcattataggtttcatcatccgaagattcagattaacaagaagactgc
aaacagaatttttcgagatattaaattattgatgataataaacattaatagggataacta
gatcgttattttcaaaaaggaaaataagcttaaaccgcccctcaaccaaagaaaccaaaa
gttattgaattcagaatggtggaggaaaccaaactgcccaacaaaggaaaagaggaagag
aaacgagacgattaatctgatgagtccgatagtgacttcgacctacctactaagttttaa
catcttgccaaaattactagaacatcaactattaatacctaagctacttaagtaactaaa
gtctaacctgaagagaaaatagcagaaactaaaacttgctaacaagaaattttaaattaa
tttgaataagaatagatttaaatgactagatttgaaattgaagaagattcacaattaaat
atcccaaacaaaccattacaaagatataagtattttctaataggaaatttttagaaatat
taaaaagaacacatcattcaaattattagatattatggagggtatcttaattgtaaaatt
cttaaagacacaattattatttaaggggattctcttaataatgctaatgatatgaaagat
aactctcttttagcgaatgctaaaatataaaaatctactattcttgattttgaagctttt
aatagtcatctaaaataatacacaggtaatgatttatagaaatctttttaattggcttgt
taatgtactatttaaaatgtaggttaataaggaatgtaagaaaaataggatttgtaatca
aaataaaaaattgtttaaaattaatcttcattcatataatcaaaatcataataataatct
aagttacctattagttaaccgatttaggaaataaatactaatcttagagcaaagtttgac
agcgacgttgtgttaattgaaaaataagttgaattgaaacctgaaatagttaatttctct
aaggataaataaatttaaaaagatcaaaagaaaatttcaaaaattgaacagataactgtt
gaagagactaaatagaaattataattatggactaataaatatgctccttctaaagtatcg
gactgtcttgattaaacccacgtttcaaatattgttaaatggctagataagtggggaaaa
acttagttagaaatttgccctggctcattctaatcttaaaactttgctgctaaagccctt
ttattatcaggtcctcctgggattggcaaaaccacaattattagattaattgcaaaataa
aagtcttattaattgattgaatggaatgcctctgacgtcagaagtaaacttcaaattgaa
aattatgttaaacatcttcaagacaatacagtgcttagatttaaggatgctaatttaatt
agtgaagggaagacaataatcttaatggatgaagtagatggaatgactggtagtgatagg
ggtggaaataagtgtttaattgatatgataaaattaacaaaggtgcctattgtttgtatt
tgcaatgagagaaacaaataatcaatgagaactttggccaattattgtttagatctgtag
tttaaaaaaccaaatcaagttgaaatttaaaagaagttagaatttatttgtaagtctgag
aatattaattacgatcctgccgaattaaaataataaatagaattttcttaatgtgatatt
agataattgctaaatttattataaatgcataaagttggcttgaaattgcatattgataaa
aatattggaaaggatggctcagttactacgaatatttatgaatcaaccaaaatattattg
aattacaaagattcttaaacattgcctattcacaaattaatggactactacttttaagat
ccagatatgacacaatttttttatcatgagaattatttagacttaattaaaaaggctcct
tcgaacacaatctcgcatatttcctaagcagcttcatcattggcagatgctgatgtgttg
aattcaaaagtaagatcacagatgtggggattaatgccaaatgtaggatttttatcgacg
atgtatcctacttaaatattgaaggggaatcttttgtcaaaagtcaattttccttagatg
cttggtcgaatttctagtgagaataaaattaaaagatagattctcgaagtgaaagaagca
tttgcttaatagacatatttaacaaacaccaaggcaattaaattctaatatattgagcct
tatgccttcattattatttaaagtttggccagtgctgggttgagttgtattgatgaagta
gtatcactgttaagaaactacaatttaaatatataatagtttgaggaatgcatagtagga
tctttggcattgtttcctaaaagggatttaatgacagagatagcatcttaggtcaaggca
tctttgaacaaagcaatgaaacaatctatggattctgcagatagatttggtaaggagagg
agactaatacaatcaaccaatattgtcaagaagactcaaaatatagaagatgatttaaat
gaagaactaaattaagaagaggagattgaggaggatgaacaaaattagaaaaagaatact
aaataaaaaaataagaatattaagtaataagagaaacataagaataaataagaaaaacaa
ggtaccgataagaataaataaagaaaaaagggtaaaaaatga
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integrated database retrieval system
