Paramecium tetraurelia: GSPATT00009513001
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Entry
GSPATT00009513001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptm03009
]
GSPATT00009513001
Enzymes [BR:
ptm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GSPATT00009513001
Ribosome biogenesis [BR:
ptm03009
]
Eukaryotic type
90S particles
Helicases
GSPATT00009513001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
Helicase_C
DEAD
HA2_C
OB_NTP_bind
AAA_22
HA2_N
Helicase_RecD
AAA_29
Motif
Other DBs
NCBI-GeneID:
5026347
NCBI-ProteinID:
XP_001440562
Genoscope:
GSPATT00009513001
UniProt:
A0CQU8
LinkDB
All DBs
Position
undetermined
AA seq
1123 aa
AA seq
DB search
MNKKDKKIQEKKEKEAKRQQLLAALAKSQLTQEQMNQLNSIKDATSSKRDRKHSVGNHME
EEVINENKEEAQQDSNSKQQVNIFQTTVYENENPIQIQQHESHQKMSEAERLEIMAKQLF
PDISLESFDQKRIPKGQVQAQPRELISEYDPEKDDIYDIDPQSITNYDTLLTDINSFKNQ
SINRDENIIKQRAQLPILIQENDIIDAIKGNLITLISGETGCGKSTQIPQFLYEAGFTEF
GAIAITQPRRLAAISLAQRVRDETGFTMGKEISYQVKHESSGIDVDRMKMKFMTDGILIN
EMQTSVMVPQYSVIIIDEAHERKVNIDLLIGVLSRVVIARAKMNKPLRLVIMSATLRLDD
FLNNKLVFPRALNLIKIQTRQYPVQIYFNKVTKDDYVSAAIEKCVKIHQTLPPGDVLIFL
TGQKEIHQCCSILNDKLQQGTRKQQIDEEYSNSEEENQQQLNQQDNEEEVQQQQEVQQQQ
QEIQQQQIDDKADYLELKNLVGTVQMTQNNAFKIDSDLSDFIVVPLYSKLDLKNQQIIFH
NNPTKKRMFVIATNVAETSITIPTIRYVVDAGKQKRKITDSKIGLEKHVIGWISQAAADQ
RSGRAGRTGPGYCYRLYSTAVYSNQFQKFDNPEITQISLDHVILQMKSIGIKDVYKFPYL
TNPDIKEIKDSLGNLIKLGAMKVKQETNSDNSNITQLGIILSQIPLSPKYGKFLLQTRIR
NLLQYGILLVCILSVEEIINKSVFQVHTQIQADDNEQDEIKQLEQEQKQQQQQIKDQFQS
YKNLKAFIEKHGEGYKISDLIYLMNIVGTAISQIKDGQDIQYQINQLSQQYHFISKSFKE
IYYNLLQILEILNVIVEDKTIVTQCVSAIKQYQRPSREAQLVLAELIVQTNGLHKVAKLQ
CKLDPERNINRYYYTTREYEQVHIHPTSIYYGKQNCEYISYCQLLTFGEQHSQITTPKVY
MVNLTEVPNKSLLYDLDTRSSQLKKLTIYENSEYYDSKNDRMMCKGSAVIENSWVLEEIE
IPFPKDQLGFYSKFARFLYSGEILQFYQILQKYYKYKVSEIRESNMQPYSQKIIKALMFN
EITTKNDLIKKWSKDKQFLLQECLDFVQEAYHQLIKSKWPPIE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaagataagaaaatctaggagaagaaagaaaaggaagccaagagacagtaa
ctgttggctgcattggctaaatcctaattgacacaagaatagatgaatcaactcaacagt
ataaaggatgccacaagtagcaaaagagaccgtaagcattctgtgggaaatcacatggag
gaagaagtcattaatgaaaataaggaagaagctcaataggatagcaatagcaaataacaa
gtgaatatatttcagaccactgtatatgagaatgagaatccaatccagattcaacaacat
gagtctcattaaaaaatgtctgaggcagaacgcttagaaatcatggccaaataactgttc
ccagacattagtttagagtcatttgattaaaaaagaatcccaaaaggataggtttaagca
taaccaagagaattgatatcagaatatgatccagagaaggatgatatttacgacattgat
ccataatcaattacaaattacgataccttgcttacagatataaattcattcaaaaattaa
tcaataaatagagatgaaaatattatcaaacaacgagcctaattaccaattttaatataa
gagaatgacatcattgatgccattaaaggcaatctaattacattaatatcgggagaaacg
gggtgtggtaagagtacttaaattccttaatttctatatgaggcaggattcacagaattt
ggtgcaattgcaatcacacaaccaagaagattggcagcaatttcattggcataaagagtg
agagatgaaactggatttactatgggcaaagagatatcttattaagttaaacatgaatct
agtggaattgatgttgatcgaatgaaaatgaaatttatgactgatggtattttaataaac
gaaatgcaaacaagtgtgatggtaccatagtattctgtaataattattgatgaggctcat
gaaagaaaggtaaacatagatttgctgatcggagtgttatcaagagtagttattgcaagg
gcaaagatgaataaaccattaaggttagttatcatgagtgccactttaagattggatgat
ttcttaaataataaactagtatttccaagagctctcaatctcatcaaaatttaaactcgt
caatatccagtacaaatatatttcaataaagtgaccaaggatgattacgtttcggcagcc
attgaaaagtgtgttaaaattcattagacactgcccccaggagatgttctaatatttctg
actggacagaaagaaatccattagtgttgtagcatattaaatgataaattacaataagga
acgagaaaataacaaatagatgaagaatactccaatagtgaagaagaaaatcaataataa
ttaaattaataagataatgaagaagaagtataataataataagaagtataataataataa
taagaaatataataataataaatagatgataaggctgattatttagaattaaaaaatcta
gttggaactgtttaaatgacatagaataatgcgtttaaaattgattcagacttatcagat
tttattgtagttccactttattctaaattagatcttaaaaattaataaatcatattccat
aataatccaactaaaaaaaggatgtttgttattgccactaatgttgcagaaacttcaatc
acaattccaactatacgttatgttgttgatgctggaaaacaaaaaaggaaaatcacagac
tccaaaattggattagaaaaacatgttattggatggatatcttaggcagctgccgatcaa
agaagtggaagagcaggtagaacaggtcctggttattgttataggctatattcaactgct
gtttactcaaatcaattctaaaaattcgacaatccagaaatcacttaaatcagtttggat
catgtcatcctacaaatgaaaagcattggaatcaaagatgtctataaatttccatacttg
acaaatccagatataaaagaaatcaaagatagtcttggtaatttgatcaaattgggagca
atgaaagtcaaataagaaactaattctgataattcaaacattacacaattaggtatcata
ttgtcttaaataccattaagtccaaaatatggtaaattcctcctataaacaagaataagg
aatttgctttaatatggcattttgttggtatgcatcttaagtgttgaagaaataatcaat
aaatcagtgtttcaagttcatactcaaatttaagcagatgataacgaataagatgaaatc
aagcagttggaataagaataaaaacaataataacaataaattaaagatcaattctaatca
tataaaaatttgaaagcttttatagaaaagcatggtgaaggatataaaataagtgactta
atatatttaatgaatattgttggaacagcaatatcttagattaaagatggtcaagatatc
taatattaaattaattaattgtcttagcaataccattttattagtaagtcattcaaagaa
atctattataatttgttacagattcttgaaattttgaatgttatagtggaagacaaaacc
atagtaactcaatgtgtttctgcaattaaatagtattaacgaccatcaagagaagctcaa
ctcgtattggctgagttaatagtgtaaacaaatgggttacataaagtggcaaaattatag
tgtaaactagatccagaaagaaatatcaatcgttattattatactactagagaatatgaa
taggtacacatacatccaacaagtatatattatggaaaatagaactgcgaatatatatca
tattgtcaactgctgactttcggagaacaacattcataaatcaccactcctaaagtttat
atggtaaatctaactgaagtaccaaataagtctctcctatatgatttggacactcgatct
agttaattaaagaagcttacaatctatgaaaatagtgagtattacgattcaaagaatgat
agaatgatgtgcaaaggaagtgctgtaatagaaaattcttgggttttagaggagatagag
ataccattccctaaggattaattgggattttattcaaaatttgcaagatttctgtattct
ggagaaatattgtagttctattagatactctaaaaatattacaaatataaggtatcagaa
attagagaatcaaatatgcaaccatattcataaaaaataataaaggcactcatgttcaat
gagataacaaccaagaatgatctcattaagaaatggtcgaaagataaacaatttctactt
taagaatgtcttgactttgtataggaagcttatcactagctcataaagtcgaaatggcca
ccaattgaatga
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integrated database retrieval system
