Paramecium tetraurelia: GSPATT00009625001 Help Entry GSPATT00009625001 CDS       T01055                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism ptm  Paramecium tetraurelia Brite KEGG Orthology (KO) [BR:ptm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ptm03021]     GSPATT00009625001 Enzymes [BR:ptm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      GSPATT00009625001     5.6.2.5  RNA 5'-3' helicase      GSPATT00009625001 Transcription machinery [BR:ptm03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      GSPATT00009625001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 AAA_22 PhoH Viral_helicase1 AAA_16 AAA_25 Motif Other DBs NCBI-GeneID:  5026492 NCBI-ProteinID:  XP_001440707 Genoscope:  GSPATT00009625001 UniProt:  A0CR93 LinkDB All DBs Position undetermined AA seq 1517 aa AA seqDB search MEEDFQCNILSDNSQDDIILKNKQTNQLTIEIEQKISLAQQDSLTKNSKILDDEFGVDII SQDSWKSIPIIDPQMSNMNNQSGLKKQNQTCDFRQTIQQEQKKPDITNHYLEQQDEFSNF NIMPSIEPKKFSHKKIKQNILQKSKSNNNVIQQLKYIDSDNTDEVDSEDDQKNKPQNNNN QLKDEIQDKKQEDQIKSKEQKQAWLLKNKRKIHENQVDKKDNEIWDFLEIVKDEPNQPNL FEQGLFKRSDYGIQTTIEQLKQQKFKKELHKSDLKRLQLSSTLMIQEQKKNEILDSTFME LQAQNNNNGIEDFSDPKDLKQNFEVSNVFNKRVESQKVNPCVQKHIIKNTENNLIESLKI PQQLQASDQFQQIIKGSNMRTMHDHQSQKNLQNQPQQVLKKPKGNEINLIQQNQSIKQEK RDFIQKCDDPSIRRDKNVDKSLKLSGRDYSNNQKQQKQQEVKQSNMEQQLQKQQRQQERF KNNLQNLDAQQQYCSLTDREKGRMKNDIQSHTLDNLLGQRGIEELLNEDNNEFRSIKVEQ KKTGESKRLSKFKMMLESNTGQSFQTGRPIFEFNRLLKYLFLKNYEIPDIADQEQKIIPN RFESALEYCKIFEYLFLNEACAQMKQELIEFLKKIEKTTKYRKAQIKIDENDHESEGSIF VMRGPQTIQQKVPQAKNKQQTELEGNDQGYQEDQLFCYDNIKDGVCDLTTHKNFVVLITN KLKLKLRQINQLQGENMCFFGILIDPQKAQYLQQIRIQTFVNKQNFNVNQWHNVFLFPFS KLTTLIREYQMITKLNQKTPLAGLIYNPSTQQQQIGSDIVGNGTDQFKNQIQNKDLLDSF FQLVDEKYNKSQANSIREIILKEKGICLVQGPPGTGKTHLLLGLLSGAYEYMKLTNKFPK KKILICTPSNAAIDEIILRIVQKGGLFDSKGNSRQANLIRIGLLDEENIHSEIIKKVSLE DLAQHKLFSSKKFNAEQDQKTTAELRIELCQIQTHVKKLEKKLTQHGLPSDERKIIKEQI MQFNDLRKTKQEYLEKTKDSKRFHKEFYNQFCEKLLNDAEIIFSTLSSSGSDKLSKYLDQ IELLIVDEAAQCTEPSNIIPLRLGIKKMILIGDPKQLPATTFSPVSHQTLYNRSLFERIL DNNVKPYFLDIQYRMHSEIRMFPSEYFYQNKLKDHESTNTRNLPSKFFKNRVLFLDILDG QEQKDGTSNINEQEAIVIVQLIKSIKEEFPTQTIGVICAYKSQVRYIKTLLKQKFQDENI FDENTISINTVDSFQGQEEDIILFSCVRSSQTGGIGFLNDGRRMNVALTRAKNALFILGN AITLSKSNLWRSMLKNIQQRKLYRRIESYNFQFEQILKDQWNQNNKTLSQKLIWYLNQTS QGNHEKSTYTISDFQIEVTGNQKTNPNQNQKIIKDTTQDVKNQQESSISYDHNYGVDCKE KERSTSEYQMSKLDIRNQKSHNIQHQIKNSNNINNKFHISKDKKVQQKRKVQADVQWQKN EYPNQEDFDIIKSLDFF NT seq 4554 nt NT seq  +upstreamnt  +downstreamnt atggaggaggattttcaatgtaacattttatccgataacagttaagatgatattatattg aaaaataaataaactaattaattgacaatagaaattgaataaaaaatatcattagcataa taagactcattaacaaaaaacagcaaaattttggatgatgaatttggagtcgatatcatt tcataggacagttggaaaagtattcccattatagatccataaatgagtaatatgaataac taatcaggattaaaaaaataaaattaaacctgtgattttagataaacaattcaataagaa tagaaaaaaccagatataacaaatcattatctagaataataagatgaattttccaatttt aatattatgccctcaatagaacccaaaaagttttcacataaaaaaataaaataaaatatt ttataaaaatcaaaaagcaataataatgtgatttaataattgaaatatattgatagtgat aacacagatgaagtggatagtgaagatgattaaaaaaacaaaccttaaaataataataat taattaaaggatgaaatttaagataagaaataggaagattaaattaaaagcaaagaataa aaataagcatggttattaaaaaataaaagaaaaatacatgaaaattaggttgataagaaa gataatgaaatttgggatttcttggagattgtaaaggatgagccaaattaacctaaccta tttgaataaggtttatttaaaaggagtgattatggtatttaaactactatagaataactt aaataacaaaaattcaaaaaggaactgcacaaatcagatttaaaaagactataactttca tctacattaatgattcaggaataaaagaaaaatgaaattctagactctacttttatggag ttataagctcaaaataataataatggaattgaagatttttctgatccaaaagatttaaaa taaaattttgaagttagcaatgtctttaataaaagagttgaatcataaaaggtaaatccg tgtgtttagaaacatattatcaaaaatacagaaaataatcttattgaatctttgaaaatt ccttaataattgcaggcatcagattaattttaataaattattaaaggttcaaatatgaga acaatgcatgaccatcaatcccaaaagaatctttaaaattaacctcaataagtattaaaa aaacctaaaggaaatgaaattaatttaatttaataaaatcaaagtattaaacaagagaaa agggactttatataaaaatgtgatgatccttctattaggcgcgataaaaatgttgataaa tctcttaaattatctggaagggattactcaaacaattagaaataacaaaaatagtaggaa gttaaacaatcaaatatggaataataattataaaagtaataaaggtaataggaaagattt aaaaataatctccaaaatttagatgcacaataacaatattgtagtttaacagatagagaa aagggaaggatgaaaaatgatatataatcacataccttagataatctcttaggttaaagg ggaattgaagagttgttaaatgaagataataatgagtttagatcaatcaaagtagaatag aagaagacgggtgaatctaaaagattatctaaatttaaaatgatgttagaaagcaataca ggacaatcattttagactggaaggcctatttttgaatttaatagattattgaagtatttg tttctgaaaaattatgaaattccagatatagcagattaagaataaaagataattccgaat agatttgaaagtgcattagaatactgtaaaatttttgaatacttatttttaaatgaggct tgtgcttaaatgaaataggagttaatagaatttttgaaaaaaatagaaaagactaccaaa tatcgcaaagcacaaataaaaatagatgaaaatgatcatgaatcagaaggatctatcttt gtcatgagaggaccttaaacgatttaataaaaggtaccttaggcaaaaaataaatagtaa acagaattagagggaaatgattaaggctattaagaagattagctattttgttatgataat attaaagatggagtttgtgatttaactactcacaaaaattttgttgtcttgataacaaat aaactaaaattaaagttaagatagattaattaattgcaaggagaaaatatgtgttttttt ggtattctgattgacccataaaaagcctagtatttgtaataaataagaattcaaaccttt gtaaataaataaaatttcaatgtaaattaatggcataatgtatttctatttccattttct aaacttactactttaatccgtgaatattagatgataacaaagttaaactaaaaaactcct ttagcaggattaatttataaccccagtacataataataacagataggttcagatatagta ggaaatggaacagattaatttaaaaatcaaatctaaaataaagatttgttagactccttt ttttagttagttgatgaaaaatacaataagagctaagcaaattcaataagagagattatt ttaaaagaaaaaggaatatgtttagtataaggaccgccgggtacagggaaaacgcattta ttacttggactattgtcgggtgcatatgaatatatgaaattgacaaataaatttccaaaa aagaaaatattaatctgtacaccatctaatgcagcaatagatgagattatattaagaata gtttaaaaaggagggttattcgattcaaaaggcaattctcgataagcgaatcttattcga attggtttacttgacgaagaaaacattcattctgaaataataaagaaggtttctttggaa gacttagcataacacaaattattttcatctaaaaaatttaatgctgagcaggattaaaaa actactgcagaattaagaattgaattatgctagatttagactcatgtgaagaaattagaa aagaaattgacttagcatggcttaccttctgatgagagaaaaataataaaggaacaaatt atgtaatttaatgatttgagaaaaactaagtaagagtacttagagaaaacaaaggatagt aaaagatttcataaagaattctataattaattttgtgaaaaattattgaatgatgctgaa atcatctttagtactctaagttctagtgggtctgataaattatctaaatacttggattaa atagaattgttgatagtagatgaagcagcctaatgtactgaaccttctaatatcattcct ttaagattaggaattaaaaagatgattttgattggagatcctaagcagctacctgctaca acattttcacccgtttcccattaaacattatataacaggagtctatttgaaaggattcta gataataatgttaagccttatttcttagatatataatatagaatgcactctgaaatcaga atgtttccatccgagtatttctattagaataagttaaaagatcatgaatcaacaaataca agaaatttaccatcaaagttctttaaaaatagagttttattcttagatatacttgatggg taagaacagaaggatggaacatcaaatattaatgaataagaagcaatagttatagtttaa ctaataaaatcaataaaagaagaatttccaacttaaacaatcggtgtgatttgtgcctat aaatcataagttagatacataaaaacgttgcttaaatagaaattctaggatgaaaacatt tttgatgagaatacaataagtatcaatactgttgattcattttaaggttaagaagaagac attatattatttagttgtgttcgttcttctcaaacaggtggaataggattcttgaatgat ggaagaagaatgaatgtagctttaacaagagctaaaaatgcactttttatacttggaaat gctattactttatcaaaaagtaatttgtggagatcgatgttgaaaaatatataataaaga aagctgtatcgaaggatagaatcctataatttttaatttgaataaatcttgaaagaccaa tggaattagaataataaaacactgtctcaaaaacttatttggtatctcaatcaaacatct caaggaaaccatgaaaaatcaacatatactatatcagatttccaaattgaagttactggg aatcaaaaaactaatccaaattagaaccaaaaaattataaaggatacaactcaagatgtc aaaaattaataagaaagttcaataagttatgaccataactatggtgtagattgtaaagag aaagagagaagcacttcagaatattaaatgtctaaattggatataaggaatcaaaaaagt cataatatttaacattaaattaaaaattcaaataatattaataataaatttcatatttca aaagataaaaaagtctaacaaaaaagaaaagtttaggcagatgtttagtggtagaagaac gagtatccaaattaagaagactttgatataataaaaagtctagactttttttga

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