Paramecium tetraurelia: GSPATT00010170001
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Entry
GSPATT00010170001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00010170001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00010170001
Spliceosome [BR:
ptm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GSPATT00010170001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
5027079
NCBI-ProteinID:
XP_001441294
Genoscope:
GSPATT00010170001
UniProt:
A0CSY0
LinkDB
All DBs
Position
undetermined
AA seq
565 aa
AA seq
DB search
MNKNKGVSKDVQTPQFLERKPQNLPQSNLNPKFKQPDLNRKLLTMPIDSKYKDVLGPDTA
SLVAYLKQKKKKEKAIQKLKDSGKIQIIKEPKQQIDRSLPQGIYETEEGKLKDISGKIIR
LNDQAKSLKINQERQKLDKIQEMLKIQNNLKDALNDKGRFLDKNVTIQRSNIKRQKRKLL
AFNFIENGNKDKEQVQQTSIQPQDEEKEKIEVKEIQNLTTTSVQTSFKRVCVKMKHHDPI
PNIEWWDLPLFPEYQANYIPLNIESEQEHKQPATAHTQEEIQKNITFLEKLQYTDTNILL
DKITKLLEHPKPFIISELVQNREKAALPSFLTKKERKKRLRKIRMDIQKEKQDKIRLGLQ
KPSPPRITLQNMMAILGAEAQIDPSKAEQEVRRQIQARLDKHIKQNEERKLTKEQRGDKL
KQKWQKDAAQEIRVAVFRIDEDLSSTDLETKKLKFKVDMNAQQVSLQGVCLIANQNGQQI
VPSILVAEGGPKGIKFYKKLLLNRIKWRCDDSKLGCTLVWEGVAKQHAFNKWRTIEIKSE
AEGKRILAEKGVEQFWDLAMNNHQN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacaaaggggtgagtaaagatgtttagacaccttaatttttagaaagaaag
ccttaaaatctcccataatcaaatttgaatccaaagtttaaatagccagatttgaataga
aaattgcttacaatgcccattgattcgaaatataaagatgtacttggaccagatactgca
agtttagtggcttatctaaaacaaaagaaaaaaaaagaaaaagcaatataaaaattaaaa
gattcagggaaaatataaataataaaggaacctaaataataaattgatagatccttgcct
taaggaatttatgaaactgaagagggaaaattaaaggacatctctggaaaaattataaga
ttaaatgactaagctaagtcactaaaaataaattaagaaaggtagaagcttgacaaaatt
taagaaatgcttaaaatttagaacaatttaaaggatgctttaaatgacaaaggacgattc
ttagataaaaatgttacgatataacgtagcaatataaaaagataaaaaagaaaacttttg
gcttttaattttattgagaatggcaataaagataaggaataagtatagtaaacctctatt
caaccctaagatgaagagaaagagaaaatagaagtaaaggaaatctaaaatttaactaca
acctcagttcaaacgagttttaaaagagtttgtgtgaagatgaaacatcatgatccaatt
ccaaatatagaatggtgggacttgccattatttcccgaatattaggcaaattatattcca
ttaaatattgaaagtgagtaggagcataaatagcctgccacagcccatacttaagaagaa
atacaaaagaatatcacatttttagagaaattataatacacagatacaaacatattattg
gataaaataaccaaattacttgagcatccaaaaccattcattataagtgaactggtacaa
aatagagaaaaagctgctttgccttcatttttaactaaaaaggaaaggaagaagcgattg
agaaaaatacgcatggatatttagaaggagaaataagataaaattagattaggtttgtag
aaaccatctccaccaagaataactttataaaatatgatggccatcttgggagctgaagca
taaatagatccaagtaaggctgaataagaagtaagaagataaatataggctagattagat
aaacatataaaataaaatgaagaaagaaaattaactaaagaataaagaggagacaaatta
aaataaaaatggtaaaaggatgctgcttaagaaatcagggttgctgtatttagaatcgat
gaggatttatcttcgacagatttagaaactaagaaactgaaatttaaagtagatatgaat
gcgtaataagtgagtttataaggtgtttgcttaattgcaaattaaaatggataatagatt
gtgccttcaattttagtagcagagggaggacctaaaggaataaaattttataagaaatta
ctattgaatagaataaaatggagatgcgatgattcaaaactaggctgcacattagtttgg
gaaggtgtagcaaagtaacatgcatttaataaatggagaactattgaaattaagagtgaa
gctgaaggaaagagaattctagcagaaaaaggagttgaacaattttgggatttggcaatg
aataaccatcaaaattga
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