Paramecium tetraurelia: GSPATT00010239001
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Entry
GSPATT00010239001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03430
Mismatch repair
ptm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GSPATT00010239001
03460 Fanconi anemia pathway
GSPATT00010239001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00010239001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
GSPATT00010239001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
Mlh1_C
Motif
Other DBs
NCBI-GeneID:
5027187
NCBI-ProteinID:
XP_001441402
Genoscope:
GSPATT00010239001
UniProt:
A0CT88
LinkDB
All DBs
Position
undetermined
AA seq
623 aa
AA seq
DB search
MIKKLPQEVINKIAAGEVVQRPYSVVKEMVENSIDAHAQNITIYLNNAGLDLIRIIDNGD
GIMKEDYELLCERYATSKIRAAEDLFQLFSFGFRGEALASISFVSEMTVISKRKDQVLGY
KGTYNSQKLLSMSPIGCSDGTEIQIAQLFYNLEKRRQALNKSEEKKSILQLIQSLSLHHS
QVQFKLFYENKCEFSSFSRLDTISSIMKINQTCIQEKSFSSDIYKYESHLIFTKLSSVKY
KRELCLFINDRFVDCDTLKKKITQAYQDCYLCLRVEDGGYYVYLSIKLQPKDIDPNVHPN
KKIVRFLNEDEISTEISEKLKQELSPQQTVKLVQTVLFQPKSQEEQKKNSFSFKQSLQNQ
QLYQKEKVRIDPKTQTLLQQFAKKSQAQLSQSLHSMIPNTQSQKIEEESNSIIDESINIK
HENPKLDDELSKNESVKIIQTNQGSKIQEEKQQIQVSRTQRFKLSVESQLELFNILQKKH
HKETQEFYKNISFVGLLQDQQQLLIQNDTKLCLINIIPMIFNMVIVQIMQGELPEGVLLI
ERQPDSLLRIICLNSQEYFLQINDNDIETTIQLAEYLSLLNYSNEFVRDFVLPFFKKYSV
AVIQNDVQVVLRLEDLYKYFERC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaattaccttaagaagtaattaataaaattgcagcaggggaagtagtttaa
agaccctattcagttgtaaaagaaatggttgaaaattcaatagatgcccatgcataaaac
atcaccatttatttaaataatgcaggattagatctaatcagaattattgataatggagat
ggaattatgaaggaagactatgaattattatgtgaaagatatgctacaagtaagattcga
gctgctgaagatttgtttcaattattctcatttggattcagaggagaggccctggcttca
atttcatttgtttctgaaatgacagtgatctctaaaagaaaagatcaagttttaggatat
aaaggcacatacaatagttagaaactgttgagtatgagtcctatcggatgctcagatggc
acagaaatttaaatagcgtaattattttataatttggaaaaaaggaggtaagctttgaat
aaatcagaagagaaaaaatcaatattgcaattaatttagagcttgagtcttcatcactct
taagtttagttcaaattattttatgagaataaatgtgagttctcatctttcagtagattg
gatacaatttcatctattatgaagattaactaaacatgcatttaagagaaatcatttagt
tctgatatatataaatatgaatctcatctgatatttacaaaattgagttctgttaaatat
aagagggaattatgtctattcataaatgacagatttgtcgattgcgatactctaaaaaag
aaaatcactcaggcctattaggattgctacttgtgcttaagagtcgaagatggaggatac
tatgtttatttgagcataaaattatagccaaaggacatagatccaaatgttcatccaaat
aaaaaaatagtaaggttcttgaatgaggatgaaattagtactgaaatatcagaaaaatta
aaataggagttatctccataataaacagtgaaattagtacagactgtgcttttctaacca
aagtcttaggaggagcagaaaaagaatagttttagcttcaagtaatcactttagaatcag
caactatattaaaaagaaaaggtcaggattgatccaaagacgtagaccttattatagtaa
tttgcaaaaaaatcacaggcctaattgtcttagagtttacacagcatgataccaaataca
taatcctaaaaaattgaagaagaaagcaattcaataatagatgaaagtataaatataaaa
cacgagaacccaaaattggatgatgaattaagcaaaaatgaaagtgttaaaataatttaa
acaaattaaggatctaaaatttaagaagaaaaacagcaaatataggtttctagaacacaa
cgctttaaactttctgttgaatcttaattagaattatttaatattttatagaaaaagcat
cataaagaaacttaagaattttataagaatatctcctttgttggattattataagattaa
caacaattactaatttaaaatgatactaaactctgtctaattaatataattccgatgata
tttaatatggttattgtttaaataatgcaaggagaattaccggaaggagtcctattaata
gagagataaccagattctttattaagaataatttgtttaaattcataagaatattttttg
cagattaatgataatgatattgagaccactatttagttggctgaatacctgtctttatta
aattacagtaatgaattcgtcagagattttgtactgccttttttcaaaaagtacagtgtt
gcagtaatataaaatgatgttcaggtagtgctaagattggaggatttatataaatatttt
gaaaggtgctga
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