KEGG   Paramecium tetraurelia: GSPATT00010403001
Entry
GSPATT00010403001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00010403001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00010403001
Spliceosome [BR:ptm03041]
 Complex C
  Other components
   Step II factors
    GSPATT00010403001
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_TEP1_C WD_LRWD1 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_SCAP GTSE1_N
Other DBs
NCBI-GeneID: 5027351
NCBI-ProteinID: XP_001441566
Genoscope: GSPATT00010403001
UniProt: A0CTQ2
LinkDB
Position
undetermined
AA seq 540 aa
MLVDYSDDEQQIMDNKPKSILVNPEVDCSHLVKKKEEEKALELSKTYNFLGQKKNHLTGN
VESIYYNDAVFEEQFHKFNVYGFAVDPNERNRRVIACNQKQEQLSSLMKEGYDVDAADPL
FSKNVLAGMHKEDKLKQQELKCNRVKANDPSKGEFMGPWAGQQDEQFENIQMNEEQQQLL
DQLEEQRKQKIDESKKQEENFVPYMEQHVSQTEQFGGRQFIAPPPELKYVDHTCYIPKRC
IQTFHGHTKGVQVIKFFPKFGHLMLSGSLDNKIKMWDIIGNKQCVRTYYGHQGALRDLNF
SNDGRTFLSAAYDKKILVWDTEYGKVTQTINLQHFPYCVRLNPDPAKQHSFLLGSSDKRI
KQFDIRSGQQTLVYDEHLQAINTITYFNQNRKFVSSSDDKKLFIWEFGIPVVIKHISDPE
MHAVTATAVNPSGLNWVGQQSNNLIIVYDTKAGNFRMNRKKNFKGHVSAGYACGVTFSAD
GQFLASGDSEGRVFFWDWKTAKSYRTIQAHDNVCIGVEWHPIEPSKVVTCGWDGVLKLWD
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgttagtggattatagtgatgatgagcaatagatcatggacaacaagccaaagtctata
ttggtgaatcctgaggttgattgttcacatctggtaaagaagaaggaggaggagaaagca
cttgaattatcaaaaacatataatttccttggatagaaaaagaatcatttaacaggaaat
gtagaatcaatatattacaatgatgcagtgtttgaagagtaatttcataaattcaatgtg
tatggttttgcagttgatcccaatgaaaggaatagaagagtgatagcatgtaattaaaaa
taagagcaattatctagtttaatgaaagaaggttatgatgtagatgcagcagatccactt
tttagtaaaaatgtacttgcaggtatgcacaaagaagacaaattgaaataataagaatta
aaatgtaatagagtgaaggctaatgatccatccaaaggagagtttatgggaccttgggca
ggacaataggatgaataatttgaaaacatataaatgaatgaagaataataataattgtta
gatcaattggaagaatagagaaaataaaaaatagatgaatcaaaaaaataagaagaaaac
tttgtgccttatatggaataacatgtaagttaaacagagtaatttggaggaagataattc
attgcacctccacctgaattaaaatatgttgatcacacatgttatatcccaaaaagatgc
atctaaacatttcatggtcacactaagggtgtataagtaattaaattctttcccaaattt
ggtcatctcatgttgagtggtagtttagacaataaaattaagatgtgggatattattggt
aacaaataatgtgttagaacatattatggtcattaaggagcactaagagatctcaacttc
tccaatgatggtaggacatttttgtcagctgcctatgataagaagattctagtttgggat
acagaatatggcaaagtcactcaaacaattaatctataacatttcccttattgtgtaaga
ctaaatccagatccagctaaacaacattcatttttgttaggatcatcagataaaagaata
aaatagtttgatatcagaagtggacaataaacattagtatatgatgaacatttacaagcc
attaacacaatcacatattttaattaaaatagaaaatttgtttccagttcagatgacaaa
aaactattcatctgggaatttggcatccctgttgttataaaacatatcagtgatcctgaa
atgcatgcagtaactgctactgctgttaatccatctggacttaattgggttggatagtaa
agtaataatttgatcattgtttatgacaccaaagctggaaatttcagaatgaatagaaag
aagaactttaaaggacatgtttctgcaggatatgcatgtggtgttacattttcagcagac
gggcaattcttagcctctggtgactcagaaggtagagtctttttttgggattggaaaaca
gctaaaagctatagaactatctaagctcatgataatgtatgcatcggtgttgaatggcat
cctattgaaccaagcaaggttgttacttgtggatgggatggagtacttaaattatgggat
tga

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