Paramecium tetraurelia: GSPATT00010683001
Help
Entry
GSPATT00010683001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00010683001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00010683001
03009 Ribosome biogenesis [BR:
ptm03009
]
GSPATT00010683001
Enzymes [BR:
ptm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSPATT00010683001
Spliceosome [BR:
ptm03041
]
Complex A
U1 snRNP components
U1 related factors
GSPATT00010683001
Complex B
GSPATT00010683001
Ribosome biogenesis [BR:
ptm03009
]
Eukaryotic type
Pre-60S particles
Helicases
GSPATT00010683001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
5027665
NCBI-ProteinID:
XP_001441880
Genoscope:
GSPATT00010683001
UniProt:
A0CUL6
LinkDB
All DBs
Position
undetermined
AA seq
604 aa
AA seq
DB search
MDDIKQFKLLKQCQDTLPAQVEAIEVNTLYINSTLEKHSKKHRRHSSSSSSSSDSSSERH
HSRRKRTHHHRRSRSPRPRSSSPIKKVLINVSIPILYQKPIQSISSVESIKEYRAQHNIF
IRSQHVTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIALTGHDLIGIAQT
GSGKTLAFLLPAIVHILAQARSHDPKCLILAPTRELTLQIYDQFQKFSVGSQLYAACLYG
GQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLDEADRMLDMGFEPQIR
KIVDQIRPQRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELTSNRMIKQIVYVMKA
IDKNQRYNQTIDGANIYTRSSISLLLYLLKDIAHKKILIFCSTKKGCDQLQKTLDREGIR
CLALHGDKKQTERDYVMSHFRNGRSTALIATDVASRGLDIKDIEVVVNYDMPKVIEDYVH
RIGRTGRAGAIGQSISFFASDEDVRMAKDLVEILRESQNDIPYELRSLIDQNTKGNNYNP
YRRWNNSGQRHMPQPFMQHQHQNQNSNQNQHQHQHQHQPSQYPSQWQFQAFNPQILQSIN
PYQI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggatgatattaaataatttaaattattaaaataatgccaagacactcttccagctcaa
gtagaagccatagaagtaaataccctttatattaattctaccctagagaagcatagtaaa
aagcaccgaagacattcaagttcttcttcttcgtcgtcggattcctcctcagagcgtcat
cattccaggagaaaaagaacccatcaccaccgtcgttcaaggtctcctcgcccacgttct
tcgagtcctatcaagaaggtgttaatcaatgtaagcattccaatcctatattagaagccc
atttaatccatatcaagcgtagagtcaatcaaagaatatagggcctaacacaatatcttc
attcgttcacaacatgtaactgtcccagatcctatcatgagatttgaggacgtttaatgt
ttcccacagatgttgatggacttactgttgaaggccggtttcaaaggacccactgccatt
taagcccaaggatggtcgattgcactaactggacatgacctcattggaatagcgcagacg
ggttctggcaaaactctagccttccttttaccagcgatcgtccacattttggcataagct
agatcccatgatcccaaatgtttgatattggctcctacaagagaattgacattacaaata
tatgatcaattttaaaagttctctgtgggatcttagctttatgcagcatgcctttatgga
ggacaagatcgctacatatagaagagccaattacgtaaaggcccttaaattttgattgct
tgtccaggtcgtttgatagatctattggattagggttgtaccaccctcaaataggttagc
ttcctcgttctcgacgaggctgatcgtatgctcgacatgggtttcgaaccacagattcgt
aagattgttgatcagatccgtccccaaagataaactatgcttttttctgcaacttggcca
aaggaggtgcaaaagttagcacttgacttttgcaaacaagagccagtccacattcaaata
ggaaatgtggaactaacatctaatagaatgatcaagcaaatagtctacgtgatgaaagca
atagataaaaattaaaggtataatcaaactattgatggtgcaaatatttatacaagatca
tcaatatctttgttgctctatttgttgaaggacatagcacataaaaaaatattaatcttt
tgttccacaaagaagggatgtgactaacttcaaaagactctagacagagaaggaattcga
tgtctcgcattacatggagataagaagcaaacggagagagattatgttatgagtcatttc
agaaatggaagatcgactgcccttattgcaactgatgtggcatcaagaggattagacatt
aaagacatagaagttgttgtcaattacgacatgccaaaagtaattgaggattatgtccac
agaatcggaagaactggtcgtgctggagctattggctaatcaatttcattctttgcttct
gatgaagatgtcagaatggccaaagatctagttgaaatacttagggaatcctaaaatgat
attccttatgaattaagaagtttgatagatcaaaataccaaaggaaataattacaatcct
tatagaagatggaataattcaggatagagacacatgccatagcctttcatgtaacatcag
cattaaaattaaaattcaaattaaaatcaacatcagcatcaacattaacattaaccatct
caatacccatcctaatggtaattttaagcattcaatccccaaatactttagtcaataaat
ccatatcaaatttga
DBGET
integrated database retrieval system
