KEGG   Paramecium tetraurelia: GSPATT00011111001
Entry
GSPATT00011111001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03082  ATP-dependent chromatin remodeling
ptm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GSPATT00011111001
   03083 Polycomb repressive complex
    GSPATT00011111001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00011111001
Enzymes [BR:ptm01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     GSPATT00011111001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     GSPATT00011111001
   HDAC complexes
    Sin3A-HDAC complex
     GSPATT00011111001
    BRAF-HDAC complex
     GSPATT00011111001
    REST complex
     GSPATT00011111001
    SHIP complex
     GSPATT00011111001
    MiDAC complex
     GSPATT00011111001
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     GSPATT00011111001
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    GSPATT00011111001
  Chromatin remodeling factors
   NuRD complex
    GSPATT00011111001
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 5028661
NCBI-ProteinID: XP_001442876
Genoscope: GSPATT00011111001
UniProt: A0CXG2
LinkDB
Position
undetermined
AA seq 482 aa
MIQADSDSSRRVAYFYNRLIGKFHYGKEHPMKPKRIAMAHSLIVNFGQLYRSLDVYLIRE
AQLEELQKFHDPEYVTYLSQYMSENKVNFVKEYCSTNNDGVIPENLLEEYRLITKWSQNK
NTKNLNSEYKVGDSADNPTFSGLFSYCQFSAGASIDCAHTILTGQADIAINWSGGLHHAK
KKEAAGFCYINDIVLCILELLRIYVRVLYVDIDCHHGDGVEEAFYLTNRVMTLSFHQYGD
DFFPGTGQLNSVGLGVGRYYAVNVPLKPGISDEPYLDLFKKVTSRVMETFRPDCVVMQCG
ADSLSLDRLGALNLSIKGHGQCISYMKQFGIPLILLGGGGYTIQNVSRCWAYETGICLGQ
TIDQSIPSNDVYYKNYGGDYHLHFPIQKNVENKNKAEDLNKIVSQVYDHLHNLENAPGIH
FHDVPYSFYPNMELEKDEDNKMKMDVKQEISLFELEKNLGISDEAHEISVNSGSRKLHSK
ES
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgatttaagccgattccgattcaagtagaagagtagcatacttttataatagattgata
gggaaatttcattatggtaaggaacatcctatgaaaccgaaacgtatcgcgatggcccat
agcctaatagtaaattttgggtaactatacagatcattggatgtctatttgattagagaa
gcacaattagaagaattacaaaaattccatgatcctgaatatgtcacttatttaagttag
tatatgagtgaaaataaggtaaactttgtaaaggaatattgttcaacaaataacgatggg
gtaatacctgagaatttgttggaagagtacagattaataactaaatggagtcaaaataag
aatactaaaaatctgaattctgagtacaaagtaggagactcagccgataatcctacattt
tcaggacttttctcttattgttaatttagtgcaggggcaagtattgattgtgcccataca
atactaaccgggtaagcagatatagcaatcaattggtcaggcggattgcatcatgctaag
aagaaggaggcagctggattttgttacataaatgacatagtattgtgcattttagagtta
ttaagaatatatgttcgagtattgtatgtagatattgattgtcatcatggcgatggagtt
gaagaagccttttatttgaccaatagagttatgactttgtcatttcattaatatggagat
gatttctttccaggaacaggataattgaattcagtaggattaggagtaggcagatattat
gcagtcaatgtgccattaaagccaggaatatctgacgaaccttacttagatttatttaag
aaagtgaccagcagagtgatggaaacatttcgtcctgattgtgttgttatgtaatgtggt
gcagattcattatcactggatcgattaggggctttgaatttatccatcaaaggacatgga
taatgcatttcctatatgaaataatttggaattccattgattcttttgggaggaggaggt
tatacaatttagaatgtgtctagatgttgggcttacgagactggcatatgtttaggacaa
actattgattagtctatcccatctaatgatgtatattacaaaaattatggcggagattat
catctacactttccaattcaaaagaatgttgaaaacaaaaataaagctgaagatttaaac
aaaatagtatcttaggtgtatgatcatttgcataacttagaaaatgcaccaggtattcat
tttcatgatgtcccatattcattctatccaaatatggaattggagaaagatgaagataat
aaaatgaaaatggatgtgaaataggagatatctttatttgaattggaaaagaatctagga
atatcagatgaagcccatgaaatatcagtaaattctggttccagaaaactacattcaaaa
gaatcctga

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