KEGG   Paramecium tetraurelia: GSPATT00011565001
Entry
GSPATT00011565001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03082  ATP-dependent chromatin remodeling
ptm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GSPATT00011565001
   03083 Polycomb repressive complex
    GSPATT00011565001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00011565001
Enzymes [BR:ptm01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     GSPATT00011565001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     GSPATT00011565001
   HDAC complexes
    Sin3A-HDAC complex
     GSPATT00011565001
    BRAF-HDAC complex
     GSPATT00011565001
    REST complex
     GSPATT00011565001
    SHIP complex
     GSPATT00011565001
    MiDAC complex
     GSPATT00011565001
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     GSPATT00011565001
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    GSPATT00011565001
  Chromatin remodeling factors
   NuRD complex
    GSPATT00011565001
SSDB
Motif
Pfam: Hist_deacetyl DUF4987
Other DBs
NCBI-GeneID: 5029146
NCBI-ProteinID: XP_001443361
Genoscope: GSPATT00011565001
UniProt: A0CYU7
LinkDB
Position
undetermined
AA seq 482 aa
MIQADSDSSRRVAYFYNRLIGKFHYGKEHPMKPKRIAMAHSLIVNFGQLYRSLDVYLIRE
AQLEELKKFHDPEYVTYLSQYMSDNKVNFVKEYCSTNNDGVIPENLLEEYRLITKWSQNK
NTKNLNAEYKVGDSADNPTFSGLFSYCQFSAGASIDCAHTILTGQADIAINWSGGLHHAK
KKEAAGFCYINDIVLCILELLRIYVRVLYVDIDCHHGDGVEEAFYLTNRVMTLSFHQYGD
DFFPGTGQLNSVGLGVGRYYAVNVPLKPGISDGPYLDLFKKVTSRVMETFRPDCVVVQCG
ADSLSLDRLGALNLSIKGHGQCITYMKQFGVPLILLGGGGYTIQNVSRCWAYETGLCLGQ
NIDEPIPTNDVYYKNYSGDYHLHFPIQEHVENKNKAEDLNKIVSQVYDHLKNLENAPGIH
FHDVPYSFYPNMDLENEDDNKINMDMKQEISLSELEQEIGVSDEANAISVNSGSRKIHSK
EV
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgatttaagctgattcggattcaagtagaagagtggcatacttttataatagattgata
ggaaaatttcattatggtaaggaacatcctatgaaacctaaacgtatcgcaatggctcat
agcttaatagtaaattttgggtaactatatagatcattggatgtatatctgattagagaa
gcataattagaagaattgaaaaagtttcatgatcctgaatacgttacttatttaagttag
tatatgagtgacaataaggtaaactttgtaaaagagtactgttcaacaaataatgatggt
gtaatacctgagaacctacttgaagaatatcgattaataactaaatggagtcaaaataag
aatactaagaatctgaatgcagaatacaaagtaggagactcagcagataatcctacattt
tcaggccttttctcatattgttaattcagtgcaggtgctagtatagattgcgcacataca
attttaactggataagcagatatagcaatcaattggtctggaggattgcatcatgctaag
aaaaaagaggctgctggattttgttatataaacgatatagtcttgtgtattttagagtta
ttgagaatttatgttcgagtcttgtatgtggatatagattgtcatcatggagatggagtt
gaagaagcattctatttaaccaatagagtcatgactttatcatttcattaatatggagat
gacttctttccaggaactggataattgaattcagtagggttaggagtaggcagatattac
gcagttaatgtgccgttaaaaccagggatttcagatggaccttacttagatttgtttaag
aaagttacaagcagagtcatggagacttttcgtcctgattgcgttgttgtgtaatgtggt
gcagattcattatcactggatcgattaggagcactaaatttatccataaaaggacatgga
tagtgtattacctatatgaaataatttggagttccattgattcttttaggaggaggaggc
tataccatttagaatgtgtctagatgttgggcttacgagacagggttatgcttaggatag
aatattgacgagcctattccaactaatgatgtttactataaaaattatagcggggattat
catttacactttccaatccaagaacatgttgaaaacaaaaataaagctgaagatttaaac
aaaattgtatctcaagtgtatgatcatctgaaaaacttagaaaatgcaccaggaattcat
tttcatgatgttccttattcattctatccaaatatggatctggagaatgaagatgacaat
aaaataaacatggacatgaaacaagagatatctttaagcgaattggaataagaaatagga
gtatctgatgaagctaatgctatctcagttaattctggttctagaaaaatacattcaaaa
gaagtttga

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