Paramecium tetraurelia: GSPATT00011879001
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Entry
GSPATT00011879001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03010
Ribosome
ptm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GSPATT00011879001
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSPATT00011879001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ptm03011
]
GSPATT00011879001
04121 Ubiquitin system [BR:
ptm04121
]
GSPATT00011879001
Ribosome [BR:
ptm03011
]
Ribosomal proteins
Eukaryotes
Large subunit
GSPATT00011879001
Archaea
GSPATT00011879001
Ubiquitin system [BR:
ptm04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
GSPATT00011879001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
TBK1_ULD
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
5029488
NCBI-ProteinID:
XP_001443703
Genoscope:
GSPATT00011879001
UniProt:
A0BUT4
LinkDB
All DBs
Position
undetermined
AA seq
129 aa
AA seq
DB search
MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGMEPTIAAIAKKYNVEKKICRVCYARLPPKAHNCRKRKCGHSNQ
LRIKKKPKD
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgtaaatttttgttaagaccctcacgggtaagaccatcacactcgatgttgagccatct
gacactatcgatgctgttaaggcaaagatctaggacaaggaaggaatccctcccgatcaa
taaagattaattttcgctggaaagcaattggaagatggaagaactctttcagattataac
atccaaaaggaatcaactctccatttggtattgagactcagaggaggtggtatggagcca
accattgctgctattgccaaaaagtacaacgttgaaaaaaaaatatgcagagtttgctat
gccagattaccaccaaaggctcacaattgcagaaagagaaagtgcggacattcaaactaa
ttaagaatcaagaagaagcccaaggattga
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