Paramecium tetraurelia: GSPATT00012802001
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Entry
GSPATT00012802001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03018
RNA degradation
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00012802001
09123 Folding, sorting and degradation
03018 RNA degradation
GSPATT00012802001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00012802001
03041 Spliceosome [BR:
ptm03041
]
GSPATT00012802001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GSPATT00012802001
mRNA degradation factors
5'-3' decay
Lsm complex
GSPATT00012802001
Spliceosome [BR:
ptm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
GSPATT00012802001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
SM-ATX
Motif
Other DBs
NCBI-GeneID:
5030475
NCBI-ProteinID:
XP_001444691
Genoscope:
GSPATT00012802001
UniProt:
A0D2M7
LinkDB
All DBs
Position
undetermined
AA seq
83 aa
AA seq
DB search
MNQLPKESIIKLQSHINKEVVIQFQGGRQVKGTLLSFDNQLNLVLDEVRELPSQRILGLV
ICRGALINSFAIDGMVEIENPYI
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgaattaattaccaaaagagtcgattataaagttgtaatcacacataaacaaagaagtt
gttatataattttaaggaggaagataagtcaaaggaaccttgttatcatttgataatcaa
ctcaatctagtattggatgaagtgagagaattgccatcacaaagaatattaggacttgta
atttgcagaggagctttgataaatagttttgcaattgatggaatggtagaaattgaaaat
ccatatatatga
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