KEGG   Paramecium tetraurelia: GSPATT00013123001
Entry
GSPATT00013123001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GSPATT00013123001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptm03000]
    GSPATT00013123001
   03021 Transcription machinery [BR:ptm03021]
    GSPATT00013123001
Transcription factors [BR:ptm03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    GSPATT00013123001
Transcription machinery [BR:ptm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     GSPATT00013123001
  RNA polymerase III system
    TFIIIB
     GSPATT00013123001
  RNA polymerase I system
    SL1/TIF-1B
     GSPATT00013123001
SSDB
Motif
Pfam: TBP DUF3378 mCpol
Other DBs
NCBI-GeneID: 5030817
NCBI-ProteinID: XP_001445032
Genoscope: GSPATT00013123001
UniProt: A0D3L8
LinkDB
Position
undetermined
AA seq 180 aa
MKTKTGEDIDKLDLDNLAHTSQNCEYKKSRFPALIQRIKDPKSTALIFEAGKMVITGTKG
QNEAEEAANKFKKQIEKNNRISIQIGDIQTSNIVANSQLPYEVNLMKINDDRSLQGSISY
DRSAFPGLIYKMQNPKLAALIFYSGKIVFTGAKNETQIKDASLVLLFKILKKHQQEKNNK
NT seq 543 nt   +upstreamnt  +downstreamnt
atgaagaccaagacaggagaagatattgataaactggatttggacaatctggctcacaca
tctcaaaattgtgaatacaaaaaaagtcgatttcctgctctgattcagagaataaaagat
cctaagtcaactgccctgatatttgaagctggtaagatggtgataacaggtaccaaaggt
tagaatgaggcagaagaagctgctaataaatttaaaaaacagatagagaagaacaacagg
attagtatacaaataggcgatatataaacaagtaacatagtagccaacagccaattgcct
tatgaagtaaatctgatgaaaataaatgatgacagaagtttacaaggatctatcagctat
gatcgatcagcattccctggattgatttataagatgtaaaatcctaaacttgctgccctc
atcttctattcaggaaagatagtcttcacaggggcaaaaaatgaaacttaaatcaaagat
gcctcattggtcttattattcaagatcctcaaaaaacactaataagaaaaaaacaataaa
tga

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