Paramecium tetraurelia: GSPATT00013178001
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Entry
GSPATT00013178001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSPATT00013178001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00013178001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GSPATT00013178001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_11
TPR_1
TPR_14
TPR_10
Mad3_BUB1_I
ANAPC3
TPR_8
Motif
Other DBs
NCBI-GeneID:
5030895
NCBI-ProteinID:
XP_001445110
Genoscope:
GSPATT00013178001
UniProt:
A0D3U6
LinkDB
All DBs
Position
undetermined
AA seq
733 aa
AA seq
DB search
MAQSFAILQNSFKHFGEGHYKESMEELQKFKQLKEQSDQNQSMVQINENIILCEYNITRD
ANVCIQKLDEIIDEIRKPQTQKSNNQSQFIILEKKQDDDSILQYNKAIMLFLSGKIRQAH
NLLKQLKDNYNLDIYLNIKVNLLLVETSFQLQEYVYASELYKKLSSDETLKSLQQKQTKP
NQIDDQQQQQSQQNYTSLLIGSDLPYPDSHPNTFSKEEFLFLLNVIKCRFYMLSNTKDQK
KQLNPLEQSFKNYMTQLDSSNGISQNSLPSFSQDIQPYLKLHAQMILKLMKAQRHLTLNE
NVHKCLKMMTPQPEIQNQQNAEFAQSKQFLYLAQIFNNLGCVHAKMGKYALAAVYFHKAI
SQTKLVQQQQNLYEGIIMNNVKQRLYAMYQNLADALFMDQQYQKALNVYNQLQDLCNQSA
KFWYNRGVCYIQIYHESMPDKNEIYEISEDQSQLNTQDEGKKIILPSREIYSDADEEVQD
QFYKIDQKNEDNKFVQSKANKELLNNAIKSFRNAIILSKKEKREEIIHLDQEQLSIQGSQ
IFESSIVFLTYSLLCRGDYNLALSQGKEALEYNLSDNNKYIIIQYVLEAYIQISKLKDAI
NFINSSSVSQFLNRINNNNNTNLQFQCRNIVGIQTTCISNYNSKAIYHFNLSALHLHNNN
LTQAWNSIQSIMNCCDININAINLAIPVPILNLLIWYYLKSDNVQLAIHLIKRRRLITGQ
IGKNKISLLNITK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcataatcatttgcaatcttataaaattcgttcaaacatttcggagaaggacattac
aaagaatctatggaggaattgcagaaatttaaacagcttaaagagcagtcggatcaaaat
caatctatggtgcaaattaatgaaaatatcatactttgtgaatacaatataactagggat
gccaatgtctgtatttaaaaattagatgaaatcatcgatgaaattagaaaaccctaaaca
taaaaaagtaataattaaagccagtttatcattttagaaaagaaacaagatgatgatagc
attttgcaatacaataaagcaatcatgctatttttgagtgggaagattagacaagctcat
aacctcttgaaatagttgaaagacaattacaaccttgacatttacttgaacattaaagta
aatctacttctagtggaaacctcatttcaattacaagaatatgtttatgcaagtgaattg
tacaaaaagttatcctctgacgaaactttaaaatcactgtaacaaaaacaaaccaaacct
aatcagattgatgattaacaataatagcaatcctaataaaactatacatcgcttttaatt
gggtcagatttgccttatccagattcacaccccaatacatttagcaaagaggaattcctt
tttctcctaaatgttattaagtgtcgtttttacatgttgtcgaacacaaaagattagaaa
aaataattaaaccctctagaataatcgtttaaaaactatatgacctaattggattcatca
aatggaatatcataaaactcactgccatccttttcacaagacatacaaccatatttgaaa
ttacatgcccaaatgattcttaaattgatgaaagcttaaaggcatttaacactgaatgag
aatgtgcataagtgccttaaaatgatgactccataacctgaaatttaaaaccaacaaaat
gcagaattcgctcaatccaaacaattcctttatttggcttaaatttttaataacctaggg
tgtgttcatgccaaaatgggcaaatatgcactcgctgctgtttattttcataaagctata
tcataaaccaaattagtctaataacagtaaaatctatatgaagggatcattatgaataat
gtgaagcaaagattatatgccatgtattaaaatctagcagatgctttgtttatggatcag
taatactaaaaggccctcaacgtttataatcaactgtaggatttgtgcaatcagagcgct
aagttttggtacaatagaggagtttgttacattcaaatttaccatgaatctatgcctgac
aagaatgaaatatacgaaatttcagaagatcagtcttaattaaatactcaagatgaaggc
aagaagatcattcttccaagtagagaaatttatagtgatgccgatgaggaagtgtaggat
tagttttacaaaattgattagaagaatgaagataacaaatttgtttaatctaaggcgaat
aaggaattactaaacaatgccataaaatcttttcgtaatgcaataatcttatccaaaaaa
gaaaaaagagaggaaatcattcatttagatcaagaataattgtcaatctaagggtcttaa
atttttgagtcctctattgtatttttaacttattctttgctgtgcagaggagattacaac
ttagcattatctcaaggtaaggaagccttagaatacaatctttcagataataataaatac
attattattcaatatgttttggaagcatacatataaatatcaaagctgaaggatgccatt
aattttatcaacagcagcagtgtctcttaatttttaaatagaattaataataataataat
accaatttataattttaatgtagaaacatagtaggaattcagacaacttgtatttcaaat
tataactctaaagctatttatcattttaatttgtcagctcttcatctccacaacaataat
ttgacttaggcttggaattcaattcaatctataatgaattgctgtgatatcaatataaat
gcaattaatttagctattccagttccaattttaaatttattaatatggtattacttgaaa
tcagataatgtttaacttgcaatccatttaatcaagagaagaagactaataacaggatag
ataggaaaaaataaaatatctctgttaaatattacaaaatga
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