Paramecium tetraurelia: GSPATT00013983001
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Entry
GSPATT00013983001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptm03016
]
GSPATT00013983001
Enzymes [BR:
ptm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
GSPATT00013983001
Transfer RNA biogenesis [BR:
ptm03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
GSPATT00013983001
Prokaryotic type
Methylthiotransferases
GSPATT00013983001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-GeneID:
5032223
NCBI-ProteinID:
XP_001446413
Genoscope:
GSPATT00013983001
UniProt:
A0D7J9
LinkDB
All DBs
Position
undetermined
AA seq
504 aa
AA seq
DB search
MFRKLIQRFPRNYFSTSKRSINEIPSLSEFMKQQDPQVNNTNNGPKFFIETYGCQMNAND
SQIVQSILSSEGYSNTNDISEADIIFLNTCSIRANAEKKVFQRMSELKSQNKVLGILGCM
AERLKEQLFVQGANIIVGPDSYKSLPTLLNSFQLTRDKQIDTNLSLTETYDDILPINPTD
SITTYVSIMRGCNNMCSFCVVPFTRGRERSRNPESILEEIQILTQKGIKEVTLLGQNVNS
YFFQDEKISSQHENTVGFTELYKLRSGNGLRFDQLLDEIAVKFPKTRIRFTSPHPKNFPK
KVLEVIAKHPNICKNIHIPIQSGSDEILKKMRRNYTRGAIVDLCNEARTLIPNVTLSTDV
IVGFCDETEYDFEQTLSLLQLVQFENAFMFAYSMREKTHAYRNLQDNVPESVKSSRLEKL
IEQQHKIMNYKNSLEIGKKHIVLVEQLGNKPNQLKGRTDSNKGVVFQNDNNIYAIGDFVE
VEILGSGLKTLSGRPLNKCEINFN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaaaattaattcaaaggtttcccagaaattacttttcaacttctaaaagaagc
atcaatgaaattccctctttatctgaattcatgaagtagtaagacccttaagtcaataac
actaataatgggcctaaattttttattgaaacatatgggtgttaaatgaatgcaaatgat
tcttaaattgtgtaatcaattttatcaagtgaggggtattctaatacaaacgacatctct
gaagctgatatcatattcttaaatacttgttcaataagagcaaatgctgagaaaaaagtg
tttcaaagaatgtcagaattaaaatcttaaaataaagttttaggcattttaggatgtatg
gcagaaagacttaaagaacagttattcgtctaaggagcaaacattattgtaggcccagat
agttataaatccctacctacactgttaaactcttttcaattaacaagagataaataaatt
gacacaaatctttcattaacagaaacttacgacgatattcttccaattaatcctactgat
agcatcacaacatatgtttctataatgagaggatgcaataatatgtgttcattttgtgtt
gttcctttcacaagaggaagagaaaggagcagaaatcctgaaagtattttagaagaaata
caaattttaacctaaaaaggaataaaggaagtcactctccttggttaaaatgtaaatagt
tacttttttcaagatgaaaaaatatcaagttaacatgaaaacacagttggctttacagaa
ctatataaattgagatctggaaatggcttaagatttgattaactcttggatgaaattgca
gttaaatttccaaaaacgagaattagatttacttcacctcatccaaagaattttccaaag
aaagttttagaagtaattgcaaaacacccaaatatttgcaagaatatccacatacctata
caatcaggttcagatgaaatattgaaaaaaatgagaagaaattacacaagaggggcaatt
gtggatttatgtaatgaagcaagaacattaattcctaatgtaaccttgtcaaccgatgta
attgttggtttttgtgatgagactgagtacgattttgaataaacattaagtttgttataa
cttgtttaatttgaaaatgcgtttatgtttgcttattcgatgagggaaaaaacacacgcg
tatagaaacttataagataatgtacctgaaagtgtcaaatcaagtcgtcttgaaaagctg
attgaacaataacacaaaataatgaattataagaattcacttgagattggaaagaaacat
atcgttttagttgaataattagggaataaacctaatcaactcaaaggtcgaacagattcc
aacaaaggtgtcgtattccagaatgataataatatctatgctattggagattttgtcgaa
gttgaaatattgggtagtggtttaaaaacactttcaggaaggcctttaaataaatgtgaa
ataaattttaattga
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