Paramecium tetraurelia: GSPATT00014494001 Help Entry GSPATT00014494001 CDS       T01055                                  Name (RefSeq) hypothetical protein   KO K19525   vacuolar protein sorting-associated protein 13A/C Organism ptm  Paramecium tetraurelia Brite KEGG Orthology (KO) [BR:ptm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ptm04131]     GSPATT00014494001 Membrane trafficking [BR:ptm04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     GSPATT00014494001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VPS13_VAB Motif Other DBs NCBI-GeneID:  5032729 NCBI-ProteinID:  XP_001446945 Genoscope:  GSPATT00014494001 UniProt:  A0D931 LinkDB All DBs Position undetermined AA seq 1915 aa AA seqDB search MCINNIYLERKKLEEFLDEDILEEKVKEVKELINEMKMEFYNEQPVSRFDIDDKLSVKAI LGEDSTDVSINIGEQKYLINAYYLKTIALFFEIPKYEDEMKSQQSPPSQQTIQAQYKQKQ PLLNVNIILLKTLIITHNEALKNCLVLQLDSFIKLIVTTIQRIKKYIQINRIQRIENWSW SLTISVFNANFAAIQKISKQTKKKMILYPIKIEFNRNQFTCECDINYSNYKLDGQHEQIS NIITQDQLRFDKIRINTSHNDYALILQTVQYQQEQVKLCDQFFSDDQESSVNETIIRQLP IKPSLVTELTILSRNDTKRKSFLPGKSQLSRLKSSVLQGSQQKDEVMQVFYAGVDQDMEM VKEEEILSEQEYQYETIKPQVKINRMKIKLDLLEIVLVNDINKSFAPLLLFRFNVKKFMF DQNYISKALKCLFQIELMYFNPVVSKMEPIIEPYLSELLIVQQNQYMQTIHINGLTPILD MNLSTDMILNLYKTLTQWQQLDQDDEEDTFRRNESKKITRLASMKGISFKENQDNVTLFS LHNKSGYALKVQKNGNDGLIEISNNDSKNYEVQSHDEDYAKTFESDTRLMIKFLDASMAQ NAISNVPINYAGVKKLQWNDQAQYYVLSTQIENLQKTITIYSPYMFVNQTDCDLSIKLSC IKITKNFILKPGEQAAMPQELYKDDSFIVIHFSDSKYTKLTQPNEPIFIKRIFHDITILI HHYPCYTLATLNTTLVQNVKYIEFKPAFILYNLLPVPLQFLFHSNENLEIQKFIINHYKR PNNVIQYEKQQSALSRGNSLSHLQNDQHDNLVRSVTITEFNYTATIKVESGLIEVVPQGQ LQLHWLKNGDHLGINLHVSGFELSQQQDITQATEFELRDTNNSQSCHIKVEKEQAKQTKL IYFSVQTCIINTTNQRLKYYTLKDEKPLLLSGQNKEPKPDKESFESNYEKIQITDTIKYL MIGVEDCISNEVNVGILGSLGLQLKQKHGGIVSLNEFGIHISLANNVIRKGVYTKVIEIM PRFVVLNNTGVQINICQSGYESQPKRLNPNERYHLIWPDCRLEKSIRVQKCGKYNWSGDL FINEIRSTNFFSSGTNENSQQLSNISIEQQKSRIFEKSGIYKQFNLKKYDPQEFLNYKES LPLQTSMLCQSSQDFFKDCLFLTAEITKVKATNFILLEQQNEENQLYKLVNKCRPFKIHY GQDSYNSFQEWVLDCDQTVPFSWEQPSHSFKLKVKFVYNQKVEHIEIIDFQQQESLQEIK FSNYFVWIKSEFQGQTRVITFQQVNETMRNMTTSHKREIEDIHKLIKLYISQLGISIITK RQNMLLEANYIYMSGIELGIMQTENETTAQLRVKFFHIDNNTSLDTTTPVLMTLRRYYQV THDRNYYFLEASCSFEHQVKAILLYNSIKIYIQPFQLQFDEEYIQVVLETIKQVKQCLQN QFELEYNGSPHSIKSLCFQTPQQRHYYLESMFQQNSSNPCIVWKSLEIKRSKKQVYIKEF VLSKIDLRFSFHKRFRTNIQYDENVFNLFSTAIGATVQNFNEAEIILDCFRLRSVYDSKD IVLQSIQDHYKSEIIRAILKIIGSIEIIGNPVKFVQQITNGVVDFVEMPIQGLRHGPLEF GVGLCKGTGSLLKNTVAGAFYSVNKVTGSISASVSLLTMDDDYLEKRRIFMLKRPDHVLD GLSQAGHCLYNGFSNGITGVVTQPYQETQKNGLKGFVKGTLKGLSGLVVKPIAGVLDASA KAAEGVVSTATHFDDKPNDTRIRYPRIFYEKSKYFQKYIALDAQVVNFLVGFMNGRYKDI EIVTCFHLKETETQLNNMQRQILSATKSIHECFKYTSKILILSYQYILVLENMTLVQEII TKEIVEISQPINGFLRLSTEFKQNIEINILLDEIELKKATSLLDYLHQQVKSQYD NT seq 5748 nt NT seq  +upstreamnt  +downstreamnt atgtgcatcaataatatatatttggaacggaaaaaattagaggaatttttggatgaggac attttggaggaaaaggttaaggaagtgaaggaactgatcaatgagatgaagatggaattt tataatgagtaaccagtgagtagatttgatatagatgacaaattgagtgtcaaagcaata ttaggtgaggactctacagatgtcagtattaatattggtgaatagaaatacttgattaat gcgtattaccttaagacaatcgctttgttttttgaaatacctaaatatgaagatgaaatg aaaagttaataatctccaccttcacaataaactattcaagcttaatacaagtaaaaatag cctctattaaatgtgaacattattttactcaagactctaataatcactcataatgaagca ttaaaaaactgtttggttttgcaattggattcgtttatcaaactcatcgtaactaccatt taaagaataaagaaatatattcaaatcaatagaatataaagaatagaaaattggagttgg agtctcacaatatcagtgtttaatgccaactttgcagctatctaaaagatatcaaaatag actaagaaaaagatgatattatatccaataaaaattgagttcaatagaaaccaatttact tgtgagtgtgatataaattactctaattataagttagatggccagcatgaataaatatct aatatcataacataggattaattaaggtttgataaaattagaatcaatacttcacacaat gattatgctctgatactacaaacagtctagtattaacaagaataggttaagttgtgcgac taatttttcagtgatgatcaagaatcttctgttaatgaaaccataattcgttagttgcct attaagccatcattagtgactgaattgacgattctgagtaggaatgatacaaaaagaaag agtttcttgcctggaaaatcgcaattaagcaggttaaaatcaagtgtgctctaagggtct caatagaaggatgaagtaatgtaggtgttttatgcaggagtagattaagacatggagatg gttaaagaggaggagattttgtctgaataggagtaccaatatgaaacaataaagccatag gtgaaaataaatagaatgaagataaagttggatcttctggagatagtattggttaatgat attaacaaatcattcgctccattattactctttagatttaatgtgaagaaatttatgttt gatcaaaactacatcagcaaagcattgaaatgtttattccaaattgaattgatgtatttc aatcctgttgtgagtaagatggaacccatcatagaaccctatctatcagaattgttgatt gtacaacaaaatcaatatatgcaaacaatccatattaatggccttacacccattttggat atgaatctatccactgatatgatcctcaatctatacaagacgttgactcaatggcagtaa ttagactaggatgatgaagaggacaccttcagaagaaatgaatccaagaagattacgaga ttggctagtatgaagggtatctctttcaaagaaaaccaagataatgtgactctcttttca cttcataataagagtgggtatgctctgaaggtttagaagaatggaaatgatggtttaata gaaatatcaaataatgattctaaaaattatgaggtacaatctcatgatgaggattatgct aagacctttgaaagtgacacaagactaatgattaaatttttagatgcttcaatggctcaa aatgctattagtaatgttcctatcaattatgctggagttaaaaaattataatggaatgac caagcataatactatgtactcagtacttaaattgagaacttgtagaaaacaattaccatt tattctccgtacatgtttgttaatcaaacagattgtgatttgtccatcaaattatcttgc atcaaaattacaaagaactttatcctcaaaccaggagaacaagcggccatgcctcaagaa ttgtataaggacgatagttttattgtgattcatttctcagattccaaatacaccaaatta actcaaccaaacgaacccatattcattaagaggatattccatgacattaccattttaata catcactacccatgttacaccttagccactctcaatactaccttagtttagaatgtcaaa tatattgaatttaaaccagcctttattttatacaatttattaccagttcctctttagttt ctgtttcactcaaatgagaatctggaaattcaaaaattcatcatcaatcattacaagaga cccaacaacgtaattcaatacgaaaagcaataatcggcattgtccagagggaattcattg tcacatttgtagaatgattaacatgataacctagtgagatcagtaacaattacagaattt aattacacagcaacaattaaagtagaatcaggattgatagaagtagttccttaagggcaa ttatagttgcattggttgaagaatggggatcatttgggaatcaatttacatgtcagtggc ttcgaattaagttagtaataagatattacataagccactgaatttgaattgagagacact aataatagttaaagttgccacatcaaggtagaaaaggaacaggctaaatagaccaaattg atttatttttcagtccaaacttgtattattaacacaacaaatcaacgattaaaatattac actttgaaagatgaaaagccactactattatcaggataaaacaaggaacctaaaccagac aaagagagttttgagagcaattatgaaaagatctaaataactgacaccattaaatatttg atgataggagtggaggattgcatctccaatgaggttaatgttggtatcttgggttctttg ggattgcaattgaagtaaaaacatggaggtatcgtttcattaaacgagttcggtattcac atttcattggcaaacaacgtaattagaaagggtgtctataccaaagtcattgagattatg ccgagatttgtggtgttgaataatacaggtgtacaaatcaatatttgttaatcgggatat gagtcataaccaaaacgattaaatccgaacgagagatatcatttgatttggcctgattgc agattagagaaatcaatcagagtctagaagtgcggtaaatacaattggagtggagacttg tttattaatgaaattagaagtacaaacttcttttcttctggcactaatgaaaatagttaa taattaagcaacatttccatagaacagcagaagagtcgaatatttgagaaatcaggcatc tacaaatagttcaatctgaagaaatacgatccttaagagtttctcaattataaagaatca ttgccattgcaaacctcaatgctttgctaatcaagttaggatttctttaaggattgcttg ttcttgactgctgaaattacgaaggtcaaggccaccaatttcattttactggaacaacaa aatgaggagaatcagctctacaaattggtcaacaagtgtaggccattcaaaatacattat ggataagatagttataacagcttttaagagtgggtgttggattgcgattaaacagtgcct ttttcttgggaacaacctagtcattcattcaagcttaaagtcaaatttgtttacaatcag aaagttgaacatattgaaatcatagatttctaataataggagagtctttaggagatcaaa ttttctaattattttgtgtggataaagtctgaattctaaggataaaccagagtcattaca ttttaataagtcaatgaaaccatgcgcaatatgactacttctcataaacgagaaattgag gatattcacaagttaattaaattgtacatctctcaattaggtatttccataataacaaag cggtaaaacatgcttcttgaagccaactacatatatatgagtggaattgaattaggaatc atgcagactgaaaatgaaactactgctcaattgagagtcaagttttttcatattgataat aacacttctttggatactactactcccgtcttgatgacattgagaaggtactattaagtc acacatgatcgaaattactactttttagaagccagttgttcctttgaacattaagtcaaa gccattttactgtacaattccatcaaaatctacatttagccattccaattacaatttgac gaagaatatattcaagtagttcttgaaaccatcaagtaagtcaaatagtgtctctaaaac taatttgaattagagtataatggatcacctcactcaatcaaatctttatgtttctaaact ccttaacaaagacattattacttggaatctatgttttaatagaactcatccaacccttgt attgtatggaagtctctagaaattaaaagatcaaagaaataggtttacatcaaagagttt gttctctccaaaatcgatttacgattctcgtttcataaaagattcagaacaaatatttaa tatgatgaaaatgtattcaatctattttctacagccattggagctacagtctaaaacttt aatgaagctgaaatcatcctagattgtttcagattaagatcagtctatgattcaaaagat attgtactccaatctatttaagatcattataagagtgagattatcagagctatcttaaaa ataattggatccattgaaatcattggaaatccagttaagtttgtgcaataaattacaaat ggagttgttgactttgttgaaatgcccatacaaggtttacgacatggtccacttgaattt ggtgttggattatgcaagggtacaggatctctattaaaaaatacagttgctggagccttc tactctgttaacaaagtcactggatctatcagtgcaagtgtttcattacttactatggat gatgattatttggaaaaacgaagaatattcatgttgaaaagacctgatcatgttttggat ggattatcctaagcaggtcattgtctttataatggattttctaatggaattactggtgtt gtcacccaaccatatcaagaaactcaaaaaaatggattaaaaggattcgttaagggcacc ctgaagggattatctggtttggttgttaagcctatagctggagttctagatgccagtgca aaagcagccgaaggtgttgtttcgactgccactcatttcgatgataaaccaaatgacacc cgaatcagatatccaaggattttctatgagaaatctaaatacttttaaaagtatattgct ttagatgctcaggtagttaatttcctggttggctttatgaatggaagatataaggacatc gaaatcgttacctgctttcacttgaaggaaactgaaacctaactcaacaacatgcagaga caaatattatctgctactaaatcgattcatgaatgttttaagtatacttctaaaatacta atactatcatattaatatattttagtacttgagaacatgacacttgtgtaagagatcata acaaaagaaatcgtagaaatatcacagccaattaatggattccttagactctcaacagaa ttcaaacaaaatatagaaatcaacatactgttagatgaaatcgaattgaaaaaagccaca tcattattagattacttacattaataagttaaaagtcaatatgattga

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