KEGG   Paramecium tetraurelia: GSPATT00015534001
Entry
GSPATT00015534001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03013  Nucleocytoplasmic transport
ptm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSPATT00015534001
   03015 mRNA surveillance pathway
    GSPATT00015534001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00015534001
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00015534001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GSPATT00015534001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     GSPATT00015534001
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 5033838
NCBI-ProteinID: XP_001448053
Genoscope: GSPATT00015534001
UniProt: A0DC89
LinkDB
Position
undetermined
AA seq 157 aa
MASNKKDQIKVDGIHGRYGRFRDNRNQNDKDKHQVPFLVRTHWKNGQITLDDFNKNQTQE
ILLYLFLSSKLRDIVDQLKYQLDGVYRRDIVFKVSNVYLDQHGVQKKKDLGTVHSVKSGK
DESSDLRDHGFKIGDILMVEIETKNQNKQPISQIAKE
NT seq 474 nt   +upstreamnt  +downstreamnt
atggcatcaaataaaaaagaccaaattaaagttgatggaatccatggcagatatggacga
ttcagagataacaggaatcaaaatgataaagacaaacatcaagtgccatttttagttaga
acacattggaaaaatggatagatcacattagatgactttaacaaaaactaaacctaggaa
atattgctttatttattcttgagttcaaaattgagagacatagtggatcaattaaaatat
caattggatggagtttacagaagagatattgtatttaaggttagcaatgtctacttggat
caacatggagtgcaaaagaaaaaggatttaggcacagtacattctgtgaagtcaggaaaa
gatgaaagttctgatctaagagaccatggtttcaaaattggagatatattaatggttgag
atcgaaacaaagaattaaaataaacaaccaatttcctaaatagcaaaggaatga

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