KEGG   Paramecium tetraurelia: GSPATT00016993001
Entry
GSPATT00016993001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K14299  nucleoporin SEH1
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSPATT00016993001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00016993001
   04131 Membrane trafficking [BR:ptm04131]
    GSPATT00016993001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSPATT00016993001
Membrane trafficking [BR:ptm04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    GSPATT00016993001
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_EML_2 WD40_Prp19 ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR3_1st WD40_WDHD1_1st WDR55 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Pep3_Vps18
Other DBs
NCBI-GeneID: 5035788
NCBI-ProteinID: XP_001450003
Genoscope: GSPATT00016993001
UniProt: A0DHT9
LinkDB
Position
undetermined
AA seq 343 aa
MLIDTTHQDIIHDIAFNFDGNRFATASSDQTMRVYNKVNGKWEKSAECKCHDGPIWKIRW
ADPKFGQLIATCSQDKGVCVWEEKKFLQENPSGQKQIIIQWKQRILILESKEAVADIQFG
SKSNGLLLAIAYVDGKLQIHRVYEQNQFIKEGEDIQIMTYGLRAISWNHAPLEREMLVAA
GNAEQQKYLSKIKMDHFNENQKFGMKKIYEFDEEKTINDVQWANQNGKSFHLIASASAEG
VKIWQIKIIKESQVEKMKVFNINRETKPNYHAYRVSWNILANLLAVSCESKKMDENQAFV
TSREVRIYQNQNGSWVAKGIIQEANFIRDSISLQHFTTNGLIS
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgcttatcgatactactcattaggatattattcatgatatagcttttaatttcgacgga
aatcgatttgcaacagcttccagcgatcaaacaatgagagtttacaacaaagtaaatggg
aaatgggaaaagagtgccgaatgcaaatgtcatgatggtccaatctggaagattagatgg
gctgatcctaaatttggataattgatagctacttgtagttaagacaaaggtgtttgtgtt
tgggaagaaaagaaattcttacaagaaaatccatcaggatagaaataaataattatataa
tggaaacagagaatattaattttagagagcaaggaagcagtggctgacatataatttggt
tcaaaatcgaatggcttattattggcaatagcgtatgtcgatgggaaattacaaattcat
agagtttatgagcagaattaattcatcaaggaaggtgaagacatttagataatgacctat
gggttgagagcaatatcatggaatcatgctccattagaaagggagatgctggtagctgca
ggtaatgcagagcaataaaagtatttaagtaaaataaaaatggaccactttaatgaaaat
caaaaatttggaatgaagaagatttatgaatttgatgaggagaaaactataaatgatgtt
caatgggcaaatcaaaatgggaagagctttcatttaattgcatctgctagtgctgaagga
gttaaaatatggtagattaagataatcaaagagagtcaagttgaaaaaatgaaagtcttt
aatatcaatcgagaaactaaacccaattatcatgcttatagagtctcttggaatattttg
gctaatcttttagcagtatcttgtgaaagcaaaaagatggatgaaaattaagcctttgtt
acttctagagaggttagaatttattaaaattaaaatgggagctgggttgcaaaaggaatc
atttaggaagccaattttataagagatagtatatcactgcaacattttacaactaatgga
ttgatttcttga

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