Paramecium tetraurelia: GSPATT00016993001
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Entry
GSPATT00016993001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K14299
nucleoporin SEH1
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSPATT00016993001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00016993001
04131 Membrane trafficking [BR:
ptm04131
]
GSPATT00016993001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSPATT00016993001
Membrane trafficking [BR:
ptm04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
GSPATT00016993001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_EML_2
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
5035788
NCBI-ProteinID:
XP_001450003
Genoscope:
GSPATT00016993001
UniProt:
A0DHT9
LinkDB
All DBs
Position
undetermined
AA seq
343 aa
AA seq
DB search
MLIDTTHQDIIHDIAFNFDGNRFATASSDQTMRVYNKVNGKWEKSAECKCHDGPIWKIRW
ADPKFGQLIATCSQDKGVCVWEEKKFLQENPSGQKQIIIQWKQRILILESKEAVADIQFG
SKSNGLLLAIAYVDGKLQIHRVYEQNQFIKEGEDIQIMTYGLRAISWNHAPLEREMLVAA
GNAEQQKYLSKIKMDHFNENQKFGMKKIYEFDEEKTINDVQWANQNGKSFHLIASASAEG
VKIWQIKIIKESQVEKMKVFNINRETKPNYHAYRVSWNILANLLAVSCESKKMDENQAFV
TSREVRIYQNQNGSWVAKGIIQEANFIRDSISLQHFTTNGLIS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgatactactcattaggatattattcatgatatagcttttaatttcgacgga
aatcgatttgcaacagcttccagcgatcaaacaatgagagtttacaacaaagtaaatggg
aaatgggaaaagagtgccgaatgcaaatgtcatgatggtccaatctggaagattagatgg
gctgatcctaaatttggataattgatagctacttgtagttaagacaaaggtgtttgtgtt
tgggaagaaaagaaattcttacaagaaaatccatcaggatagaaataaataattatataa
tggaaacagagaatattaattttagagagcaaggaagcagtggctgacatataatttggt
tcaaaatcgaatggcttattattggcaatagcgtatgtcgatgggaaattacaaattcat
agagtttatgagcagaattaattcatcaaggaaggtgaagacatttagataatgacctat
gggttgagagcaatatcatggaatcatgctccattagaaagggagatgctggtagctgca
ggtaatgcagagcaataaaagtatttaagtaaaataaaaatggaccactttaatgaaaat
caaaaatttggaatgaagaagatttatgaatttgatgaggagaaaactataaatgatgtt
caatgggcaaatcaaaatgggaagagctttcatttaattgcatctgctagtgctgaagga
gttaaaatatggtagattaagataatcaaagagagtcaagttgaaaaaatgaaagtcttt
aatatcaatcgagaaactaaacccaattatcatgcttatagagtctcttggaatattttg
gctaatcttttagcagtatcttgtgaaagcaaaaagatggatgaaaattaagcctttgtt
acttctagagaggttagaatttattaaaattaaaatgggagctgggttgcaaaaggaatc
atttaggaagccaattttataagagatagtatatcactgcaacattttacaactaatgga
ttgatttcttga
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integrated database retrieval system