KEGG   Paramecium tetraurelia: GSPATT00017711001
Entry
GSPATT00017711001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    GSPATT00017711001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptm03021]
    GSPATT00017711001
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00017711001
Transcription machinery [BR:ptm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     GSPATT00017711001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     GSPATT00017711001
SSDB
Motif
Pfam: zf-CCHC
Other DBs
NCBI-GeneID: 5036549
NCBI-ProteinID: XP_001450764
Genoscope: GSPATT00017711001
UniProt: A0DK00
LinkDB
Position
undetermined
AA seq 187 aa
MFNPSGPKDKPLCMEFQKDICMKLLCTLEHKYWPCPDYDKGFCYLGSSCDKLKLKHIVRK
LCMDYVYGFCKDGPECKMQHVKLFDLNDRTQELRFTERFYSKLKQEQATFKQSEINVKPV
ICKSCQEVGHKSNVCKKTLRLSPNRKILCGICETEHTIYDQGKKQDCQYKISQSQQQLLF
QQQSSEQ
NT seq 564 nt   +upstreamnt  +downstreamnt
atgtttaatccttctggtcctaaagacaagcccttatgcatggaattttagaaagatatt
tgcatgaagcttttatgtactttagaacacaaatattggccatgtcctgattatgacaaa
ggattttgttatttgggttcttcatgtgataagttaaaattaaaacacatagtaagaaaa
ttatgtatggattatgtctatggattctgtaaggatggacctgaatgcaaaatgcaacat
gtcaaattatttgacttgaatgatagaacataggaactcagatttacagaaagattttat
tccaaattaaaacaagaataagctacatttaaataaagcgaaataaatgttaaaccagtt
atttgcaagtcttgctaggaagttggtcataaatcaaatgtctgcaaaaaaactttaagg
ttaagtccaaatagaaaaattctatgcggtatttgtgaaactgaacatacaatctatgat
tagggcaaaaaataagattgccaatacaaaatctcacagtcataataataattattgttt
taacaataatcttcagaataatga

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