Paramecium tetraurelia: GSPATT00017987001
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Entry
GSPATT00017987001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00017987001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00017987001
Spliceosome [BR:
ptm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GSPATT00017987001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Motif
Other DBs
NCBI-GeneID:
5036867
NCBI-ProteinID:
XP_001451068
Genoscope:
GSPATT00017987001
UniProt:
A0DKV4
LinkDB
All DBs
Position
undetermined
AA seq
246 aa
AA seq
DB search
MAEARKLMVPTQENEIKSQLRQLGQLVTYFGEGAADRGQRLHSLLTEHLMQYGRLPQFFN
NRTIIIWCVEQLRAAKLSFHNAALRVGKQRLRRLTVEALQEGQGVLEEMQKVNQWIWRMQ
IVGHSNCLTKVKFFVHLTKCHSVAFHPQSLLTISPQSFANVATASADLSIRLWTLDLDQQ
ESIGLKGHEDRINKVIFHQDGEGLISMETQTESMVQTGHSREIYSGALHPDGSLLFTGDL
GGFGQI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcacgtaaattgatggtgcctactcaggaaaatgagatcaagtcatagtta
agataattagggtagctagtaacttattttggtgaaggtgctgctgataggggatagcga
ctacactcattgttaacagaacacttgatgtaatacgggagattgccttagttttttaac
aatagaacaatcataatatggtgtgttgaataattgagggctgccaagttatcttttcac
aatgcagcactaagagttgggaaacagagattaagaagattgactgttgaggctttataa
gaaggttaaggggtgttggaggaaatgtagaaagtaaaccagtggatctggagaatgtaa
attgtgggacattcaaactgcctcactaaagtcaagtttttcgtacatttaactaagtgt
cattctgttgcttttcatccttaatctttattaacaatatctccgtaatcctttgccaat
gttgccactgcatcagctgatctgtcaattagattatggacattggatttggattagtaa
gagtcgattggattgaaaggccatgaagacaggataaacaaagtaatatttcattaggat
ggtgaaggattgataagtatggaaacttaaactgaatcaatggtctagactggacattcc
agggaaatctactcaggagccttgcatccagatggttccttattgtttacaggggattta
ggaggatttggatagatttga
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integrated database retrieval system