Paramecium tetraurelia: GSPATT00018271001
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Entry
GSPATT00018271001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03015
mRNA surveillance pathway
ptm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSPATT00018271001
09123 Folding, sorting and degradation
03018 RNA degradation
GSPATT00018271001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00018271001
03041 Spliceosome [BR:
ptm03041
]
GSPATT00018271001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GSPATT00018271001
mRNA cycle factors
Stress granule specific factors
GSPATT00018271001
Spliceosome [BR:
ptm03041
]
Complex C
Other components
Complex C specific factors
GSPATT00018271001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_3
RRM_Nup35
xRRM
RRM_5
DnaA_N-like_STI
Motif
Other DBs
NCBI-GeneID:
5037235
NCBI-ProteinID:
XP_001451450
Genoscope:
GSPATT00018271001
UniProt:
A0DLY6
LinkDB
All DBs
Position
undetermined
AA seq
487 aa
AA seq
DB search
MNTTSIPAERTLYVSKYPQQTTTEQLKKIFSEFGQIEQITSQGSGVCIIYKENQSVTSAL
QKSININGEEPYVCQYLNIAQLDLEANVFIDNIDKKETQSSLRQLFSQFGTILSVKLQKS
DKVGVAYIQFDKKESADKCIAEQSKLGFKIQKFTSKKQHRDQVYISNIKVQPNVTPDQLK
SDLQTFVSSFGTVESLVLNRNTTNGTFFAFVKFVNQDSAKAAVKSNKLFNDQQIHIEWVV
NNVDKDIEANLFTKNLKADITEEDLRKALNLVVPVEDIKLMPSKQPPNGSRPPTQIAYLY
FKTADDGKQLIAYAYDHPQIASLYVNGVISLSPLLPPSEVSSLLQVKKNTFQRQFHQPAY
QQYQQQMPPPPYYQQQQRYPQQQPPRQHHNGHRYPQQKRPYYPQQQQIPDLPQLQVMVDR
GQKQQVTDLIGMQLFPKVTQVVGPINAPQVTGILLDFENYQLSDQVRMIQDSAYLGENIR
QALEILK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatactacatcaatcccagcagaacgcactctgtatgtttcaaaataccctcaataa
acaaccactgaacaattaaagaaaatattctcagaattcggccaaattgaataaatcacc
tcccaaggatcaggagtttgtataatctataaggaaaatcaaagtgtcacttctgctctc
taaaaatcgattaatatcaatggtgaggagccctacgtttgttaatacttaaatatagct
cagctggatcttgaagctaatgtctttattgacaatatcgataagaaagagactcaatca
tctcttcgctaacttttcagttaatttggaactatcctcagtgtcaaattatagaagtca
gacaaagtgggtgttgcctatatataatttgacaaaaaagagtcagctgataaatgcata
gccgaataatccaaattaggatttaaaatttagaaattcacatccaaaaaacaacacaga
gatcaagtgtacataagtaacatcaaagtccagccaaatgtcactccagatcaactaaaa
tctgacttacagacctttgtttcctcctttggaactgtggaatcattggttttgaataga
aacacaacaaatgggacattttttgcatttgtaaaatttgtcaattaggacagtgcaaaa
gcagctgtcaaatccaataaattgtttaatgatcaataaatccacatcgaatgggtcgtc
aataatgttgacaaagacatcgaagccaacttgttcaccaaaaatctgaaagccgacatc
actgaagaagatttgaggaaagctctcaatttggtagtgcctgttgaggatatcaaatta
atgccatcaaaacaaccaccaaatggtagtagaccacccactcaaatagcctatttatat
ttcaaaacagctgatgacggcaagtaactgatcgcatatgcatatgatcatcctcaaatt
gcctcattgtatgtgaatggagtaatatccctttcccctcttttgccaccttccgaagtg
agttccctattgcaagtgaagaaaaataccttctaaagataattccatcaacctgcatac
taataatatcagtaatagatgccccctccaccctattattaataataacaaagatatcct
taataataaccacccagatagcatcacaatggacatagatatccacaatagaagagaccc
tattatccccagtaataacaaatcccagatttaccctaattataagttatggttgataga
ggctaaaaatagcaagttactgatttgattggaatgtagctatttccaaaagtaacccaa
gttgttggccctattaatgcaccacaagttactggcatcttgcttgattttgaaaattat
taattaagcgattaggttaggatgattcaagattcagcttatttgggcgagaatatcaga
taggcacttgaaattcttaaatga
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