KEGG   Paramecium tetraurelia: GSPATT00018356001
Entry
GSPATT00018356001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12602  WD repeat-containing protein 61
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSPATT00018356001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00018356001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     GSPATT00018356001
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_DCAF12 WD40_like WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_RIG_1st Beta-prop_EIPR1 VPS11_N Beta-prop_VPS8 BBS2_Mid Beta-prop_Nup120_160 Beta-prop_WDR35_2nd Baculo_LEF-11 Beta-prop_LRRK2 Helicase_PWI
Other DBs
NCBI-GeneID: 5037320
NCBI-ProteinID: XP_001451535
Genoscope: GSPATT00018356001
UniProt: A0DM71
LinkDB
Position
undetermined
AA seq 287 aa
MIQEITNFSIPESPSCMDISKEFLAIGTLDENVFLYSQPFQSKSNETILKNHLLGVIDLS
INADETQIVVSSLDNYLRIWDIDDKKLISEIQCDAFANWKVRFFDSSIVVTSGEMGIINF
YHVDTKERIQKIETDPIYYSSSLQIHDQLLAVGNEGGSLFLIDQKFQKKAIKPHSKPIKS
ILFLDNNKILTGSEDGLIKLIDLEKFEIIKQFRGHKYGVMDFCKINEKSFVSCSTDRTIR
VWDVNQIYSQKHIQTMNDKPGGISGIRYKNDQIIAAHDCGIISFYAI
NT seq 864 nt   +upstreamnt  +downstreamnt
atgatctaggagattacaaatttctcaattccagagagtccaagttgcatggatatttca
aaagagtttttggccattggcacattggatgaaaatgtatttctctactctcaacccttt
caatccaaatcgaatgaaaccatattgaaaaatcatcttttgggagtcatagatttatct
atcaatgcagacgaaacctaaattgtggtctcatcattagataattatcttcgaatctgg
gatatcgatgataagaagctgatttctgaaatataatgtgatgcctttgccaattggaaa
gtcagattttttgattcgtcaattgttgtgacttctggggaaatgggaatcattaacttt
tatcacgttgacaccaaagagagaattcaaaaaatagaaacagacccaatttattattca
agttcactctagattcatgattaattgttagctgttggtaatgaaggtggcagtctattt
ttgattgattaaaagtttcaaaagaaggcaatcaaacctcattcaaaaccaataaagtca
atcctatttctggacaacaacaaaattctaacaggatcagaggatggattaattaaactc
atagacctagagaaatttgaaatcattaaacagtttagaggtcataaatatggtgtaatg
gatttctgtaaaatcaatgagaaatcatttgtcagttgctctacggacagaacaattcga
gtatgggatgttaaccaaatctactctcagaaacatatacagaccatgaatgacaaacct
ggaggaatcagcggtattcgatacaagaatgaccaaatcatagctgctcatgattgtggc
attataagcttttatgctatatga

DBGET integrated database retrieval system