Paramecium tetraurelia: GSPATT00019215001
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Entry
GSPATT00019215001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00019215001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00019215001
Spliceosome [BR:
ptm03041
]
Common components
Common spliceosomal components
SR proteins
GSPATT00019215001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_3
SET_assoc
zf-CCHC_2
DbpA
RRM_9
RBD_DEAH11
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
5038215
NCBI-ProteinID:
XP_001452430
Genoscope:
GSPATT00019215001
UniProt:
A0DPR6
LinkDB
All DBs
Position
undetermined
AA seq
189 aa
AA seq
DB search
MGDIVPNQLFVAGYSRSKVSGDKDIKEIFKKYGTIKDVAYKGSYSFVTFSNEQEAQDALK
ATNGQTYNGQKLKVDVVDNKKGRKTGPNDEDKCFKCSKGGHWARNCPNGRSPRRSRRRSN
SRSKRRHRRSVSRSYSSNSSSRSRRRRYQNRRKRHSRSPRRDARQKKRSISPRRSPSDSG
SSKRKNSIS
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgggagatatcgtcccaaatcaactttttgttgcaggttacagtcgtagcaaagtatct
ggagacaaagatataaaggaaatctttaaaaagtatggaacaattaaggatgtggcatat
aagggatcttactcatttgtaacttttagtaatgaacaagaggcgcaagatgcgttaaag
gcaacaaatgggcaaacatataatggatagaaattgaaagttgatgtggtagataacaaa
aagggaagaaaaactggaccaaatgatgaggataaatgtttcaaatgcagtaaaggtggg
cattgggctcgtaattgtcctaatggaagatcaccaagaaggagcagaaggaggtctaat
tcaagatccaagaggcgtcatagaagatctgtttctagatcatactcttcaaattcatca
tctagatctagaagaagaagatatcaaaacagaagaaaaagacatagcagaagtccaagg
agagatgcgagataaaaaaagagaagcattagtcctagaagatcaccctctgattcagga
tcatccaaacgaaagaattcaatatcttga
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integrated database retrieval system